Details for gene set KEGG_ALLOGRAFT_REJECTION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	LG
GeneSet	KEGG_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.56746066
Normalized Enrichment Score (NES)	1.444345
Nominal p-value	0.057692308
FDR q-value	0.25727972
FWER p-Value	0.986

Fig 1: Enrichment plot: KEGG_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD28	Cd28			300	2.082	0.2012	Yes
2	FAS	Fas			579	1.684	0.3618	Yes
3	CD40	Cd40			745	1.502	0.5103	Yes
4	HLA-DOB	H2-Ob			2093	0.810	0.5092	Yes
5	HLA-DMA	H2-DMa			2968	0.581	0.5144	Yes
6	IL4	Il4			3065	0.559	0.5675	Yes
7	HLA-DQB1	H2-Ab1			4149	0.407	0.5407	No
8	GZMB	Gzmb			5595	0.209	0.4697	No
9	CD80	Cd80			5808	0.180	0.4751	No
10	IL2	Il2			6130	0.142	0.4695	No
11	PRF1	Prf1			7529	0.000	0.3794	No
12	TNF	Tnf			7693	0.000	0.3689	No
13	IL12A	Il12a			8218	-0.028	0.3381	No
14	FASLG	Fasl			10236	-0.227	0.2321	No
15	IL5	Il5			10308	-0.234	0.2523	No
16	IL10	Il10			13916	-0.793	0.1037	No

Fig 2: KEGG_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_ALLOGRAFT_REJECTION