Details for gene set KEGG_AUTOIMMUNE_THYROID_DISEASE[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	LG
GeneSet	KEGG_AUTOIMMUNE_THYROID_DISEASE
Enrichment Score (ES)	0.63333076
Normalized Enrichment Score (NES)	1.662262
Nominal p-value	0.0089126555
FDR q-value	0.07849365
FWER p-Value	0.39

Fig 1: Enrichment plot: KEGG_AUTOIMMUNE_THYROID_DISEASE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD28	Cd28			300	2.082	0.1417	Yes
2	TG	Tg			329	2.041	0.2977	Yes
3	FAS	Fas			579	1.684	0.4119	Yes
4	CD40	Cd40			745	1.502	0.5175	Yes
5	TSHB	Tshb			1885	0.867	0.5111	Yes
6	HLA-DOB	H2-Ob			2093	0.810	0.5604	Yes
7	TSHR	Tshr			2826	0.611	0.5604	Yes
8	HLA-DMA	H2-DMa			2968	0.581	0.5963	Yes
9	IL4	Il4			3065	0.559	0.6333	Yes
10	HLA-DQB1	H2-Ab1			4149	0.407	0.5949	No
11	GZMB	Gzmb			5595	0.209	0.5180	No
12	CD80	Cd80			5808	0.180	0.5182	No
13	IL2	Il2			6130	0.142	0.5085	No
14	PRF1	Prf1			7529	0.000	0.4184	No
15	CTLA4	Ctla4			7881	0.000	0.3957	No
16	FASLG	Fasl			10236	-0.227	0.2615	No
17	IL5	Il5			10308	-0.234	0.2750	No
18	IL10	Il10			13916	-0.793	0.1038	No

Fig 2: KEGG_AUTOIMMUNE_THYROID_DISEASE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_AUTOIMMUNE_THYROID_DISEASE: Random ES distribution   
Gene set null distribution of ES for KEGG_AUTOIMMUNE_THYROID_DISEASE