Datasetpreliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotypephenotype.cls#LG_versus_HG_repos
Upregulated in classHG
GeneSetKEGG_ECM_RECEPTOR_INTERACTION
Enrichment Score (ES)-0.33999917
Normalized Enrichment Score (NES)-1.3052408
Nominal p-value0.06051873
FDR q-value0.35848427
FWER p-Value0.998
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_ECM_RECEPTOR_INTERACTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VWFVwf113.7670.0545No
2CHADChad3781.9640.0596No
3COL11A2Col11a24151.9090.0853No
4GP1BAGp1ba5971.6570.0978No
5COL4A4Col4a46121.6440.1210No
6ITGA9Itga96141.6420.1450No
7ITGB5Itgb58101.4460.1536No
8LAMA1Lama18601.4050.1710No
9LAMA3Lama39711.3180.1832No
10LAMB3Lamb312941.1020.1785No
11GP5Gp513111.0930.1935No
12ITGB7Itgb713931.0560.2037No
13RELNReln18910.8660.1842No
14GP1BBGp1bb20410.8250.1867No
15ITGA10Gm4295720990.8100.1949No
16ITGB6Itgb622160.7820.1988No
17THBS3Thbs323470.7420.2013No
18VTNVtn33460.5060.1441No
19LAMC3Lamc339010.4280.1145No
20COL2A1Col2a143940.3800.0882No
21COL5A2Col5a244780.3650.0882No
22GP9Gp945640.3500.0878No
23ITGB4Itgb448020.3120.0771No
24COL5A3Col5a350630.2780.0643No
25LAMB2Lamb253890.2360.0467No
26COL4A6Col4a662630.129-0.0079No
27FN1Fn162720.127-0.0066No
28TNXBTnxb65090.099-0.0204No
29AGRNAgrn66350.085-0.0272No
30ITGA11Itga1167670.070-0.0347No
31GP6Gp675090.000-0.0827No
32IBSPIbsp76090.000-0.0891No
33ITGB8Itgb87970-0.006-0.1123No
34SDC2Sdc28342-0.040-0.1357No
35ITGA8Itga88483-0.052-0.1441No
36ITGA7Itga79113-0.117-0.1831No
37ITGA2BItga2b9122-0.117-0.1819No
38SDC3Sdc39372-0.141-0.1959No
39THBS1Thbs19661-0.170-0.2121No
40SDC1Sdc110005-0.204-0.2313No
41LAMA2Lama210249-0.228-0.2437No
42LAMC2Lamc210283-0.232-0.2424No
43ITGA5Itga510612-0.266-0.2598No
44ITGA3Itga310773-0.284-0.2660No
45DAG1Dag110890-0.295-0.2691No
46ITGAVItgav10977-0.305-0.2702No
47CD47Cd4711015-0.309-0.2681No
48ITGB1Itgb111361-0.348-0.2853No
49CD44Cd4411395-0.352-0.2823No
50THBS4Thbs412181-0.432-0.3268No
51SV2BSv2b12235-0.440-0.3238No
52LAMB1Lamb112329-0.446-0.3233No
53HSPG2Hspg212363-0.451-0.3188No
54COL6A6Col6a612543-0.483-0.3233No
55COL4A1Col4a112625-0.491-0.3214No
56COL1A2Col1a212914-0.534-0.3322Yes
57ITGA2Itga212923-0.536-0.3248Yes
58COL11A1Col11a112986-0.548-0.3208Yes
59COL4A2Col4a213046-0.562-0.3164Yes
60LAMC1Lamc113207-0.600-0.3180Yes
61SV2CSv2c13220-0.602-0.3099Yes
62ITGA4Itga413649-0.711-0.3272Yes
63COL1A1Col1a113688-0.723-0.3191Yes
64ITGA6Itga613973-0.809-0.3256Yes
65LAMA5Lama514003-0.818-0.3155Yes
66HMMRHmmr14199-0.883-0.3152Yes
67COMPComp14208-0.884-0.3027Yes
68SV2ASv2a14214-0.887-0.2900Yes
69COL5A1Col5a114238-0.898-0.2784Yes
70ITGA1Itga114526-1.039-0.2817Yes
71SDC4Sdc414801-1.261-0.2810Yes
72LAMA4Lama415118-1.696-0.2766Yes
73SPP1Spp115131-1.718-0.2522Yes
74COL6A3Col6a315151-1.768-0.2275Yes
75COL6A1Col6a115185-1.824-0.2029Yes
76COL6A2Col6a215240-1.962-0.1776Yes
77TNRTnr15265-2.028-0.1494Yes
78COL3A1Col3a115313-2.188-0.1204Yes
79THBS2Thbs215404-2.585-0.0884Yes
80TNCTnc15451-2.893-0.0489Yes
81TNNTnn15508-3.6600.0011Yes
Table: GSEA details [plain text format]



Fig 2: KEGG_ECM_RECEPTOR_INTERACTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_ECM_RECEPTOR_INTERACTION: Random ES distribution   
Gene set null distribution of ES for KEGG_ECM_RECEPTOR_INTERACTION