Details for gene set KEGG_GLYCEROPHOSPHOLIPID_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	LG
GeneSet	KEGG_GLYCEROPHOSPHOLIPID_METABOLISM
Enrichment Score (ES)	0.46125993
Normalized Enrichment Score (NES)	1.5880698
Nominal p-value	0.0063795852
FDR q-value	0.117359854
FWER p-Value	0.666

Fig 1: Enrichment plot: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PLA2G2E	Pla2g2e			13	3.648	0.0881	Yes
2	CDS1	Cds1			54	3.051	0.1599	Yes
3	ETNK2	Etnk2			634	1.611	0.1617	Yes
4	LCAT	Lcat			695	1.553	0.1957	Yes
5	PLA2G12A	Pla2g12a			844	1.420	0.2208	Yes
6	GPAT3	Gpat3			969	1.319	0.2449	Yes
7	PLPP1	Plpp1			1137	1.198	0.2633	Yes
8	PISD	Pisd			1216	1.142	0.2861	Yes
9	PCYT1A	Pcyt1a			1353	1.073	0.3035	Yes
10	CDIPT	Cdipt			1640	0.958	0.3084	Yes
11	CHKA	Chka			1644	0.956	0.3315	Yes
12	DGKQ	Dgkq			1814	0.891	0.3423	Yes
13	PLD2	Pld2			1861	0.875	0.3606	Yes
14	PHOSPHO1	Phospho1			1866	0.873	0.3816	Yes
15	PLD1	Pld1			1892	0.866	0.4012	Yes
16	PLPP2	Plpp2			1977	0.839	0.4162	Yes
17	PLA2G15	Pla2g15			2333	0.745	0.4114	Yes
18	PLA2G4E	Pla2g4e			2865	0.604	0.3918	Yes
19	GPAT4	Gpat4			2926	0.591	0.4023	Yes
20	CDS2	Cds2			2954	0.585	0.4148	Yes
21	DGKH	Dgkh			2967	0.581	0.4282	Yes
22	PLA2G4A	Pla2g4a			3193	0.536	0.4267	Yes
23	MBOAT2	Mboat2			3309	0.512	0.4318	Yes
24	AGPAT1	Agpat1			3359	0.505	0.4409	Yes
25	PEMT	Pemt			3413	0.494	0.4495	Yes
26	PLA2G12B	Pla2g12b			3419	0.494	0.4613	Yes
27	PLA2G10	Pla2g10			4141	0.407	0.4245	No
28	LYPLA2	Lypla2			4243	0.404	0.4278	No
29	LPCAT4	Lpcat4			4267	0.401	0.4361	No
30	LPCAT3	Lpcat3			4547	0.353	0.4267	No
31	ADPRM	Adprm			4715	0.324	0.4238	No
32	ACHE	Ache			4969	0.289	0.4145	No
33	LPGAT1	Lpgat1			5242	0.255	0.4031	No
34	AGPAT2	Agpat2			5445	0.228	0.3956	No
35	MBOAT7	Mboat7			5517	0.218	0.3963	No
36	PCYT1B	Pcyt1b			5664	0.199	0.3917	No
37	TAZ	Taz			5767	0.185	0.3896	No
38	AGPAT3	Agpat3			5889	0.169	0.3859	No
39	GPAT2	Gpat2			5978	0.159	0.3841	No
40	PTDSS1	Ptdss1			6036	0.152	0.3841	No
41	DGKI	Dgki			6290	0.125	0.3708	No
42	CRLS1	Crls1			6329	0.120	0.3713	No
43	GPD2	Gpd2			6858	0.061	0.3386	No
44	LPCAT1	Lpcat1			7083	0.036	0.3250	No
45	GPD1L	Gpd1l			7095	0.035	0.3252	No
46	PLA2G5	Pla2g5			7857	0.000	0.2759	No
47	PTDSS2	Ptdss2			8252	-0.031	0.2512	No
48	CHPT1	Chpt1			8733	-0.078	0.2220	No
49	DGKB	Dgkb			8801	-0.083	0.2197	No
50	PLA2G1B	Pla2g1b			8815	-0.085	0.2210	No
51	GPAM	Gpam			8818	-0.085	0.2229	No
52	LYPLA1	Lypla1			9149	-0.120	0.2045	No
53	GPD1	Gpd1			9441	-0.147	0.1892	No
54	PLA2G2D	Pla2g2d			9718	-0.175	0.1757	No
55	PLA2G6	Pla2g6			9756	-0.179	0.1776	No
56	DGKE	Dgke			9801	-0.184	0.1792	No
57	DGKZ	Dgkz			9981	-0.202	0.1726	No
58	PGS1	Pgs1			10426	-0.248	0.1499	No
59	ETNK1	Etnk1			10785	-0.285	0.1337	No
60	GNPAT	Gnpat			11327	-0.344	0.1071	No
61	PCYT2	Pcyt2			11608	-0.377	0.0982	No
62	DGKD	Dgkd			11823	-0.406	0.0942	No
63	PLA2G3	Pla2g3			11824	-0.406	0.1041	No
64	LPCAT2	Lpcat2			12195	-0.434	0.0907	No
65	DGKG	Dgkg			12526	-0.479	0.0811	No
66	AGPAT4	Agpat4			13317	-0.624	0.0452	No
67	MBOAT1	Mboat1			14127	-0.857	0.0137	No
68	DGKA	Dgka			14909	-1.378	-0.0032	No
69	LCLAT1	Lclat1			15150	-1.763	0.0243	No

Fig 2: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYCEROPHOSPHOLIPID_METABOLISM