Details for gene set KEGG_GLYCOSAMINOGLYCAN_DEGRADATION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	LG
GeneSet	KEGG_GLYCOSAMINOGLYCAN_DEGRADATION
Enrichment Score (ES)	0.7066219
Normalized Enrichment Score (NES)	1.8751518
Nominal p-value	0.001776199
FDR q-value	0.0078560645
FWER p-Value	0.025

Fig 1: Enrichment plot: KEGG_GLYCOSAMINOGLYCAN_DEGRADATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HPSE	Hpse			270	2.166	0.1191	Yes
2	HEXB	Hexb			568	1.696	0.2068	Yes
3	HS3ST3B1	Hs3st3b1			573	1.691	0.3131	Yes
4	GNS	Gns			940	1.341	0.3740	Yes
5	SGSH	Sgsh			1014	1.287	0.4504	Yes
6	HYAL1	Hyal1			1335	1.080	0.4978	Yes
7	HS3ST3A1	Hs3st3a1			1610	0.965	0.5409	Yes
8	IDUA	Idua			1753	0.911	0.5892	Yes
9	NAGLU	Naglu			2088	0.812	0.6188	Yes
10	GUSB	Gusb			2612	0.665	0.6270	Yes
11	HGSNAT	Hgsnat			2696	0.644	0.6622	Yes
12	HYAL2	Hyal2			2873	0.603	0.6889	Yes
13	HYAL4	Hyal4			3533	0.477	0.6765	Yes
14	ARSB	Arsb			3608	0.469	0.7012	Yes
15	HYAL3	Hyal3			3938	0.423	0.7066	Yes
16	GLB1	Glb1			7216	0.021	0.4967	No
17	GALNS	Galns			9915	-0.195	0.3350	No
18	HPSE2	Hpse2			12097	-0.424	0.2210	No

Fig 2: KEGG_GLYCOSAMINOGLYCAN_DEGRADATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYCOSAMINOGLYCAN_DEGRADATION: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYCOSAMINOGLYCAN_DEGRADATION