Details for gene set KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	HG
GeneSet	KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM
Enrichment Score (ES)	-0.6277349
Normalized Enrichment Score (NES)	-1.667385
Nominal p-value	0.009569378
FDR q-value	0.10999164
FWER p-Value	0.323

Fig 1: Enrichment plot: KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MDH1	Mdh1			6002	0.156	-0.3639	No
2	ACO2	Aco2			6746	0.072	-0.4012	No
3	AFMID	Afmid			6844	0.062	-0.3983	No
4	HAO2	Hao2			7652	0.000	-0.4503	No
5	GLYCTK	Glyctk			8288	-0.034	-0.4862	No
6	MDH2	Mdh2			8302	-0.036	-0.4818	No
7	MTHFD2L	Mthfd2l			8838	-0.085	-0.5037	No
8	CS	Cs			9361	-0.140	-0.5167	No
9	ACO1	Aco1			10261	-0.230	-0.5409	No
10	MTHFD1L	Mthfd1l			10955	-0.302	-0.5411	No
11	PGP	Pgp			11176	-0.328	-0.5070	No
12	MTHFD1	Mthfd1			13050	-0.563	-0.5448	Yes
13	HYI	Hyi			13234	-0.604	-0.4676	Yes
14	MTHFD2	Mthfd2			13395	-0.642	-0.3834	Yes
15	GRHPR	Grhpr			13995	-0.816	-0.3018	Yes
16	HAO1	Hao1			15424	-2.718	0.0065	Yes

Fig 2: KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM