Details for gene set KEGG_HOMOLOGOUS_RECOMBINATION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	HG
GeneSet	KEGG_HOMOLOGOUS_RECOMBINATION
Enrichment Score (ES)	-0.5639774
Normalized Enrichment Score (NES)	-1.6276777
Nominal p-value	0.011904762
FDR q-value	0.12702008
FWER p-Value	0.438

Fig 1: Enrichment plot: KEGG_HOMOLOGOUS_RECOMBINATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NBN	Nbn			3174	0.539	-0.1393	No
2	XRCC3	Xrcc3			5563	0.213	-0.2676	No
3	RPA1	Rpa1			5708	0.194	-0.2533	No
4	XRCC2	Xrcc2			6028	0.153	-0.2554	No
5	RAD54L	Rad54l			6641	0.084	-0.2846	No
6	RPA2	Rpa2			6685	0.080	-0.2777	No
7	POLD2	Pold2			7193	0.024	-0.3075	No
8	TOP3A	Top3a			7358	0.007	-0.3172	No
9	TOP3B	Top3b			8503	-0.054	-0.3845	No
10	POLD1	Pold1			8634	-0.068	-0.3846	No
11	SSBP1	Ssbp1			8869	-0.089	-0.3889	No
12	RAD51	Rad51			9044	-0.109	-0.3869	No
13	RAD51D	Rad51d			9270	-0.131	-0.3855	No
14	MRE11	Mre11a			11053	-0.313	-0.4625	No
15	RAD52	Rad52			12628	-0.492	-0.5043	Yes
16	MUS81	Mus81			12634	-0.493	-0.4449	Yes
17	EME1	Eme1			12833	-0.522	-0.3945	Yes
18	RPA3	Rpa3			13181	-0.595	-0.3448	Yes
19	BLM	Blm			13664	-0.715	-0.2892	Yes
20	RAD51C	Rad51c			14040	-0.833	-0.2125	Yes
21	BRCA2	Brca2			14580	-1.070	-0.1176	Yes
22	RAD51B	Rad51b			14977	-1.472	0.0353	Yes

Fig 2: KEGG_HOMOLOGOUS_RECOMBINATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_HOMOLOGOUS_RECOMBINATION: Random ES distribution   
Gene set null distribution of ES for KEGG_HOMOLOGOUS_RECOMBINATION