Details for gene set KEGG_OXIDATIVE_PHOSPHORYLATION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	LG
GeneSet	KEGG_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)	0.4585911
Normalized Enrichment Score (NES)	1.7159932
Nominal p-value	0.0015527951
FDR q-value	0.064198524
FWER p-Value	0.236

Fig 1: Enrichment plot: KEGG_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COX6A2	Cox6a2			3	4.063	0.0763	Yes
2	ATP6V0B	Atp6v0b			684	1.564	0.0616	Yes
3	ATP6V0D1	Atp6v0d1			720	1.529	0.0881	Yes
4	ATP6V1A	Atp6v1a			968	1.319	0.0969	Yes
5	ATP6V1F	Atp6v1f			973	1.317	0.1214	Yes
6	ATP6AP1	Atp6ap1			994	1.304	0.1447	Yes
7	ATP6V1G1	Atp6v1g1			1046	1.261	0.1651	Yes
8	ATP6V1B2	Atp6v1b2			1067	1.247	0.1873	Yes
9	MT-ND4	mt-Nd4			1100	1.223	0.2082	Yes
10	NDUFA4L2	Ndufa4l2			1121	1.210	0.2297	Yes
11	MT-ND6	mt-Nd6			1232	1.133	0.2439	Yes
12	ATP6V1D	Atp6v1d			1297	1.100	0.2605	Yes
13	MT-ND5	mt-Nd5			1425	1.042	0.2718	Yes
14	ATP6V1C1	Atp6v1c1			1491	1.008	0.2866	Yes
15	MT-ND2	mt-Nd2			1548	0.986	0.3015	Yes
16	TCIRG1	Tcirg1			1552	0.985	0.3199	Yes
17	LHPP	Lhpp			1558	0.982	0.3380	Yes
18	UQCRQ	Uqcrq			1648	0.955	0.3502	Yes
19	ATP6V1H	Atp6v1h			1666	0.945	0.3669	Yes
20	ATP6V1G2	Atp6v1g2			1971	0.843	0.3630	Yes
21	COX5B	Cox5b			2152	0.799	0.3664	Yes
22	ATP6V1E1	Atp6v1e1			2158	0.797	0.3811	Yes
23	MT-CYB	mt-Cytb			2250	0.773	0.3897	Yes
24	ATP6V0E2	Atp6v0e2			2279	0.764	0.4023	Yes
25	ATP6V0C	Atp6v0c			2362	0.737	0.4108	Yes
26	COX8C	Cox8b			2685	0.646	0.4021	Yes
27	MT-ND1	mt-Nd1			2700	0.642	0.4133	Yes
28	NDUFB9	Ndufb9			2998	0.573	0.4048	Yes
29	COX7A1	Cox7a1			3057	0.561	0.4116	Yes
30	ATP6V0E1	Atp6v0e			3073	0.557	0.4211	Yes
31	ATP6V0A1	Atp6v0a1			3146	0.543	0.4266	Yes
32	ATP6V0A2	Atp6v0a2			3190	0.536	0.4339	Yes
33	ATP6V0A4	Atp6v0a4			3241	0.528	0.4406	Yes
34	NDUFS7	Ndufs7			3362	0.504	0.4423	Yes
35	NDUFA1	Ndufa1			3395	0.498	0.4496	Yes
36	ATP6V1C2	Atp6v1c2			3402	0.497	0.4586	Yes
37	NDUFB6	Ndufb6			3814	0.432	0.4401	No
38	COX7B2	Cox7b2			4000	0.421	0.4360	No
39	NDUFS8	Ndufs8			4063	0.417	0.4398	No
40	MT-CO1	mt-Co1			4064	0.417	0.4476	No
41	COX5A	Cox5a			4281	0.397	0.4411	No
42	COX7A2L	Cox7a2l			4974	0.289	0.4017	No
43	COX8A	Cox8a			5132	0.271	0.3966	No
44	NDUFA10	Ndufa10			5273	0.251	0.3922	No
45	COX4I1	Cox4i1			5301	0.248	0.3951	No
46	NDUFA5	Ndufa5			5352	0.242	0.3964	No
47	NDUFA2	Ndufa2			5361	0.240	0.4004	No
48	NDUFV1	Ndufv1			5648	0.201	0.3856	No
49	MT-CO2	mt-Co2			5674	0.198	0.3877	No
50	NDUFS6	Ndufs6			5849	0.174	0.3797	No
51	NDUFB7	Ndufb7			5894	0.168	0.3800	No
52	NDUFB4	Ndufb4			6009	0.155	0.3756	No
53	NDUFS3	Ndufs3			6090	0.146	0.3731	No
54	NDUFA9	Ndufa9			6103	0.145	0.3751	No
55	CYC1	Cyc1			6122	0.143	0.3766	No
56	UQCR10	Uqcr10			6139	0.141	0.3782	No
57	PPA1	Ppa1			6144	0.140	0.3806	No
58	NDUFB5	Ndufb5			6160	0.139	0.3823	No
59	NDUFS5	Ndufs5			6319	0.122	0.3743	No
60	NDUFA6	Ndufa6			6414	0.110	0.3703	No
61	COX10	Cox10			6492	0.102	0.3672	No
62	COX7C	Cox7c			6805	0.065	0.3482	No
63	SDHB	Sdhb			6917	0.055	0.3420	No
64	NDUFB1	Ndufb1-ps			7008	0.045	0.3370	No
65	COX6A1	Cox6a1			7077	0.036	0.3333	No
66	COX11	Cox11			7084	0.036	0.3336	No
67	SDHC	Sdhc			7086	0.036	0.3342	No
68	ATP4A	Atp4a			7179	0.026	0.3287	No
69	NDUFB3	Ndufb3			7356	0.007	0.3174	No
70	NDUFA8	Ndufa8			7412	0.002	0.3139	No
71	MT-ATP6	mt-Atp6			7555	0.000	0.3047	No
72	MT-CO3	mt-Co3			7729	0.000	0.2935	No
73	COX17	Cox17			7803	0.000	0.2888	No
74	MT-ND4L	mt-Nd4l			7879	0.000	0.2839	No
75	NDUFC1	Ndufc1			7937	-0.003	0.2802	No
76	NDUFS4	Ndufs4			8020	-0.010	0.2751	No
77	ATP5F1E	Atp5e			8023	-0.010	0.2752	No
78	UQCRB	Uqcrb			8025	-0.011	0.2753	No
79	NDUFA4	Ndufa4			8027	-0.011	0.2755	No
80	ATP5MF	Atp5j2			8110	-0.019	0.2705	No
81	ATP5PD	Atp5h			8167	-0.025	0.2673	No
82	NDUFB10	Ndufb10			8329	-0.039	0.2576	No
83	NDUFS2	Ndufs2			8687	-0.073	0.2358	No
84	NDUFS1	Ndufs1			8719	-0.076	0.2353	No
85	COX4I2	Cox4i2			8807	-0.084	0.2312	No
86	COX6C	Cox6c			8935	-0.096	0.2248	No
87	ATP5F1D	Atp5d			9134	-0.118	0.2141	No
88	COX6B1	Cox6b1			9141	-0.119	0.2160	No
89	ATP5PF	Atp5j			9296	-0.134	0.2085	No
90	ATP5F1B	Atp5b			9370	-0.141	0.2064	No
91	NDUFA3	Ndufa3			9616	-0.166	0.1937	No
92	PPA2	Ppa2			9704	-0.174	0.1913	No
93	ATP5F1C	Atp5c1			9706	-0.174	0.1945	No
94	NDUFV3	Ndufv3			9809	-0.184	0.1914	No
95	ATP5MC3	Atp5g3			10054	-0.209	0.1795	No
96	ATP4B	Atp4b			10066	-0.211	0.1827	No
97	NDUFV2	Ndufv2			10193	-0.222	0.1787	No
98	UQCRC2	Uqcrc2			10364	-0.240	0.1722	No
99	ATP5ME	Atp5k			10627	-0.267	0.1603	No
100	COX7A2	Cox7a2			10673	-0.273	0.1625	No
101	UQCRC1	Uqcrc1			10805	-0.287	0.1594	No
102	NDUFB2	Ndufb2			10880	-0.294	0.1601	No
103	ATP5F1A	Atp5a1			11636	-0.380	0.1183	No
104	NDUFAB1	Ndufab1			11683	-0.388	0.1226	No
105	ATP12A	Atp12a			11954	-0.418	0.1130	No
106	UQCRFS1	Uqcrfs1			12508	-0.475	0.0860	No
107	COX7B	Cox7b			12640	-0.494	0.0868	No
108	COX6B2	Cox6b2			14123	-0.857	0.0068	No
109	ATP6V1B1	Atp6v1b1			15237	-1.959	-0.0285	No
110	ATP6V0D2	Atp6v0d2			15389	-2.504	0.0088	No

Fig 2: KEGG_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for KEGG_OXIDATIVE_PHOSPHORYLATION