Details for gene set KEGG_O_GLYCAN_BIOSYNTHESIS[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#LG_versus_HG.phenotype.cls#LG_versus_HG_repos
Phenotype	phenotype.cls#LG_versus_HG_repos
Upregulated in class	LG
GeneSet	KEGG_O_GLYCAN_BIOSYNTHESIS
Enrichment Score (ES)	0.4526746
Normalized Enrichment Score (NES)	1.3135978
Nominal p-value	0.12978369
FDR q-value	0.44816405
FWER p-Value	1.0

Fig 1: Enrichment plot: KEGG_O_GLYCAN_BIOSYNTHESIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GALNT13	Galnt13			297	2.083	0.0894	Yes
2	GALNT9	Galnt9			368	1.977	0.1879	Yes
3	GALNT17	Galnt17			823	1.438	0.2335	Yes
4	GALNT12	Galnt12			1219	1.140	0.2674	Yes
5	GCNT3	Gcnt3			1319	1.087	0.3177	Yes
6	GALNT3	Galnt3			1571	0.978	0.3525	Yes
7	GALNT10	Galnt10			1703	0.932	0.3925	Yes
8	B4GALT5	B4galt5			2026	0.829	0.4149	Yes
9	GALNT15	Galnt15			2329	0.746	0.4343	Yes
10	GALNTL6	Galntl6			2588	0.671	0.4527	Yes
11	B3GNT6	B3gnt6			3316	0.512	0.4324	No
12	GALNT2	Galnt2			5140	0.270	0.3289	No
13	GALNT16	Galnt16			6445	0.107	0.2503	No
14	GALNT7	Galnt7			6663	0.082	0.2406	No
15	GALNTL5	Galntl5			7665	0.000	0.1760	No
16	ST6GALNAC1	St6galnac1			8473	-0.051	0.1266	No
17	ST3GAL2	St3gal2			8891	-0.091	0.1044	No
18	C1GALT1	C1galt1			9371	-0.141	0.0808	No
19	ST3GAL1	St3gal1			9610	-0.165	0.0741	No
20	GALNT14	Galnt14			9699	-0.174	0.0775	No
21	GCNT1	Gcnt1			10908	-0.296	0.0150	No
22	C1GALT1C1	C1galt1c1			11153	-0.326	0.0162	No
23	GALNT1	Galnt1			11671	-0.385	0.0029	No
24	GALNT11	Galnt11			11688	-0.388	0.0221	No
25	GALNT5	Galnt5			12179	-0.432	0.0130	No
26	GALNT6	Galnt6			13288	-0.618	-0.0264	No
27	GCNT4	Gcnt4			14782	-1.238	-0.0582	No
28	GALNT18	Galnt18			15267	-2.035	0.0166	No

Fig 2: KEGG_O_GLYCAN_BIOSYNTHESIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_O_GLYCAN_BIOSYNTHESIS: Random ES distribution   
Gene set null distribution of ES for KEGG_O_GLYCAN_BIOSYNTHESIS