Details for gene set KEGG_ALLOGRAFT_REJECTION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_HG.phenotype.cls#NG_versus_HG_repos
Phenotype	phenotype.cls#NG_versus_HG_repos
Upregulated in class	NG
GeneSet	KEGG_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.50515246
Normalized Enrichment Score (NES)	1.3316541
Nominal p-value	0.1356674
FDR q-value	0.32092914
FWER p-Value	0.996

Fig 1: Enrichment plot: KEGG_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD28	Cd28			66	4.009	0.2683	Yes
2	FAS	Fas			855	2.122	0.3618	Yes
3	IL4	Il4			1121	1.841	0.4698	Yes
4	HLA-DMA	H2-DMa			1940	1.295	0.5052	Yes
5	CD40	Cd40			3134	0.836	0.4851	No
6	PRF1	Prf1			4436	0.501	0.4353	No
7	TNF	Tnf			4444	0.501	0.4689	No
8	GZMB	Gzmb			5618	0.314	0.4147	No
9	IL2	Il2			5775	0.287	0.4242	No
10	FASLG	Fasl			6216	0.206	0.4098	No
11	HLA-DOB	H2-Ob			7509	0.000	0.3265	No
12	HLA-DQB1	H2-Ab1			7618	0.000	0.3196	No
13	IL10	Il10			8729	-0.130	0.2568	No
14	IL12A	Il12a			10308	-0.418	0.1835	No
15	IL5	Il5			12455	-0.868	0.1042	No
16	CD80	Cd80			13671	-1.378	0.1195	No

Fig 2: KEGG_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_ALLOGRAFT_REJECTION