Details for gene set KEGG_AUTOIMMUNE_THYROID_DISEASE[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_HG.phenotype.cls#NG_versus_HG_repos
Phenotype	phenotype.cls#NG_versus_HG_repos
Upregulated in class	NG
GeneSet	KEGG_AUTOIMMUNE_THYROID_DISEASE
Enrichment Score (ES)	0.54581416
Normalized Enrichment Score (NES)	1.4846162
Nominal p-value	0.04474273
FDR q-value	0.16574538
FWER p-Value	0.849

Fig 1: Enrichment plot: KEGG_AUTOIMMUNE_THYROID_DISEASE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD28	Cd28			66	4.009	0.2264	Yes
2	TG	Tg			803	2.180	0.3044	Yes
3	FAS	Fas			855	2.122	0.4232	Yes
4	IL4	Il4			1121	1.841	0.5121	Yes
5	HLA-DMA	H2-DMa			1940	1.295	0.5338	Yes
6	CD40	Cd40			3134	0.836	0.5050	Yes
7	TSHR	Tshr			3223	0.807	0.5458	Yes
8	TSHB	Tshb			3985	0.603	0.5314	No
9	PRF1	Prf1			4436	0.501	0.5312	No
10	GZMB	Gzmb			5618	0.314	0.4732	No
11	IL2	Il2			5775	0.287	0.4797	No
12	FASLG	Fasl			6216	0.206	0.4632	No
13	HLA-DOB	H2-Ob			7509	0.000	0.3798	No
14	HLA-DQB1	H2-Ab1			7618	0.000	0.3729	No
15	CTLA4	Ctla4			7992	0.000	0.3488	No
16	IL10	Il10			8729	-0.130	0.3089	No
17	IL5	Il5			12455	-0.868	0.1186	No
18	CD80	Cd80			13671	-1.378	0.1196	No

Fig 2: KEGG_AUTOIMMUNE_THYROID_DISEASE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_AUTOIMMUNE_THYROID_DISEASE: Random ES distribution   
Gene set null distribution of ES for KEGG_AUTOIMMUNE_THYROID_DISEASE