Details for gene set KEGG_ENDOCYTOSIS[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_HG.phenotype.cls#NG_versus_HG_repos
Phenotype	phenotype.cls#NG_versus_HG_repos
Upregulated in class	NG
GeneSet	KEGG_ENDOCYTOSIS
Enrichment Score (ES)	0.37783647
Normalized Enrichment Score (NES)	1.5878602
Nominal p-value	0.0
FDR q-value	0.11756118
FWER p-Value	0.564

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KDR	Kdr	5	4.757	0.0299	Yes
2	ARAP2	Arap2	97	3.810	0.0483	Yes
3	CHMP4C	Chmp4c	148	3.568	0.0677	Yes
4	CXCR4	Cxcr4	164	3.494	0.0890	Yes
5	RET	Ret	216	3.285	0.1066	Yes
6	RAB11FIP4	Rab11fip4	486	2.620	0.1058	Yes
7	FGFR3	Fgfr3	607	2.421	0.1134	Yes
8	ASAP3	Asap3	614	2.412	0.1283	Yes
9	EHD3	Ehd3	641	2.369	0.1417	Yes
10	ARAP1	Arap1	644	2.361	0.1566	Yes
11	ADRB2	Adrb2	649	2.357	0.1713	Yes
12	GRK4	Grk4	941	2.003	0.1652	Yes
13	SH3GL3	Sh3gl3	960	1.981	0.1766	Yes
14	GIT1	Git1	1003	1.942	0.1862	Yes
15	PIKFYVE	Pikfyve	1032	1.910	0.1966	Yes
16	ADRB1	Adrb1	1038	1.903	0.2083	Yes
17	PARD6G	Pard6g	1254	1.743	0.2054	Yes
18	VPS25	Vps25	1255	1.741	0.2165	Yes
19	RNF41	Rnf41	1335	1.675	0.2220	Yes
20	SH3GL2	Sh3gl2	1382	1.631	0.2294	Yes
21	CXCR2	Cxcr2	1416	1.605	0.2375	Yes
22	LDLR	Ldlr	1504	1.549	0.2417	Yes
23	PLD2	Pld2	1523	1.535	0.2503	Yes
24	PLD1	Pld1	1533	1.529	0.2594	Yes
25	TRAF6	Traf6	1548	1.520	0.2682	Yes
26	HSPA8	Hspa8	1554	1.517	0.2775	Yes
27	CLTC	Cltc	1572	1.504	0.2860	Yes
28	PRKCZ	Prkcz	1596	1.487	0.2940	Yes
29	VPS37D	Vps37d	1688	1.427	0.2971	Yes
30	CHMP2B	Chmp2b	1967	1.283	0.2872	Yes
31	HGS	Hgs	1974	1.281	0.2950	Yes
32	SMURF1	Smurf1	1984	1.276	0.3025	Yes
33	IQSEC1	Iqsec1	2090	1.225	0.3035	Yes
34	MDM2	Mdm2	2120	1.210	0.3093	Yes
35	GIT2	Git2	2130	1.202	0.3163	Yes
36	STAM	Stam	2181	1.182	0.3206	Yes
37	CHMP1B	Chmp1b	2201	1.173	0.3268	Yes
38	VPS37B	Vps37b	2205	1.172	0.3341	Yes
39	FGFR2	Fgfr2	2210	1.170	0.3413	Yes
40	RAB31	Rab31	2348	1.111	0.3394	Yes
41	RAB11FIP5	Rab11fip5	2354	1.109	0.3462	Yes
42	STAM2	Stam2	2363	1.105	0.3527	Yes
43	PIP5K1B	Pip5k1b	2443	1.065	0.3543	Yes
44	PSD4	Psd4	2614	1.003	0.3496	Yes
45	CBLB	Cblb	2684	0.974	0.3513	Yes
46	PSD	Psd	2686	0.973	0.3575	Yes
47	ARFGAP3	Arfgap3	2699	0.968	0.3629	Yes
48	PARD6B	Pard6b	2750	0.948	0.3656	Yes
49	RAB11FIP1	Rab11fip1	2773	0.940	0.3702	Yes
50	ACAP3	Acap3	2817	0.927	0.3733	Yes
51	RAB22A	Rab22a	2913	0.892	0.3728	Yes
52	RABEP1	Rabep1	2945	0.880	0.3764	Yes
53	VPS4B	Vps4b	3039	0.857	0.3758	Yes
54	PIP5K1A	Pip5k1a	3091	0.847	0.3778	Yes
55	STAMBP	Stambp	3342	0.773	0.3665	No
56	MVB12A	Mvb12a	3613	0.696	0.3533	No
57	RAB11FIP3	Rab11fip3	3676	0.681	0.3536	No
58	SMURF2	Smurf2	3733	0.666	0.3542	No
59	CLTA	Clta	3736	0.665	0.3583	No
60	SMAP1	Smap1	3749	0.663	0.3618	No
61	IQSEC2	Iqsec2	3947	0.610	0.3528	No
62	FGFR4	Fgfr4	3962	0.606	0.3558	No
63	PSD2	Psd2	3977	0.604	0.3587	No
64	ASAP1	Asap1	4053	0.583	0.3575	No
65	SH3GLB1	Sh3glb1	4120	0.567	0.3569	No
66	CBL	Cbl	4304	0.530	0.3483	No
67	VPS37A	Vps37a	4347	0.524	0.3489	No
68	RAB11B	Rab11b	4350	0.523	0.3521	No
69	TSG101	Tsg101	4422	0.503	0.3507	No
70	KIT	Kit	4580	0.493	0.3436	No
71	IGF1R	Igf1r	4597	0.491	0.3457	No
72	PARD3	Pard3	4647	0.479	0.3456	No
73	RAB11A	Rab11a	4662	0.477	0.3477	No
74	DNAJC6	Dnajc6	4675	0.474	0.3499	No
75	EEA1	Eea1	4731	0.461	0.3493	No
76	ERBB4	Erbb4	4824	0.443	0.3461	No
77	CHMP4B	Chmp4b	4901	0.439	0.3440	No
78	AP2A1	Ap2a1	4992	0.437	0.3409	No
79	HSPA2	Hspa2	5179	0.397	0.3313	No
80	RAB5B	Rab5b	5209	0.390	0.3319	No
81	AGAP2	Agap2	5266	0.379	0.3307	No
82	SNF8	Snf8	5360	0.362	0.3269	No
83	ERBB3	Erbb3	5398	0.355	0.3268	No
84	SMAP2	Smap2	5427	0.351	0.3272	No
85	GRK5	Grk5	5808	0.282	0.3042	No
86	AGAP1	Agap1	5834	0.278	0.3044	No
87	MVB12B	Mvb12b	5867	0.272	0.3040	No
88	ARF6	Arf6	5875	0.270	0.3053	No
89	F2R	F2r	5886	0.266	0.3063	No
90	PIP4K2B	Pip4k2b	5921	0.259	0.3058	No
91	RAB5A	Rab5a	6071	0.231	0.2975	No
92	VPS37C	Vps37c	6169	0.216	0.2926	No
93	CHMP5	Chmp5	6304	0.189	0.2851	No
94	PIP5K1C	Pip5k1c	6519	0.148	0.2721	No
95	HRAS	Hras	6623	0.128	0.2662	No
96	DAB2	Dab2	6636	0.126	0.2662	No
97	RAB11FIP2	Rab11fip2	6640	0.126	0.2668	No
98	USP8	Usp8	6737	0.107	0.2613	No
99	LDLRAP1	Ldlrap1	6857	0.086	0.2541	No
100	IQSEC3	Iqsec3	7125	0.050	0.2370	No
101	GRK3	Grk3	7127	0.050	0.2373	No
102	ACAP2	Acap2	7146	0.050	0.2364	No
103	TFRC	Tfrc	7255	0.033	0.2296	No
104	SH3GLB2	Sh3glb2	7271	0.030	0.2288	No
105	DNM2	Dnm2	7314	0.024	0.2262	No
106	IL2RA	Il2ra	7469	0.000	0.2162	No
107	VTA1	Vta1	8105	-0.013	0.1750	No
108	ARFGAP1	Arfgap1	8159	-0.024	0.1717	No
109	AP2S1	Ap2s1	8209	-0.035	0.1687	No
110	PARD6A	Pard6a	8254	-0.042	0.1661	No
111	ASAP2	Asap2	8311	-0.055	0.1628	No
112	CBLC	Cblc	8356	-0.063	0.1603	No
113	EPN1	Epn1	8397	-0.070	0.1582	No
114	AP2B1	Ap2b1	8486	-0.086	0.1530	No
115	FLT1	Flt1	8504	-0.090	0.1525	No
116	NEDD4L	Nedd4l	8665	-0.119	0.1428	No
117	AP2M1	Ap2m1	9079	-0.191	0.1172	No
118	SRC	Src	9120	-0.199	0.1158	No
119	ARRB2	Arrb2	9209	-0.212	0.1114	No
120	WWP1	Wwp1	9244	-0.220	0.1106	No
121	VPS28	Vps28	9282	-0.227	0.1097	No
122	CDC42	Cdc42	9285	-0.228	0.1110	No
123	RAB5C	Rab5c	9296	-0.230	0.1118	No
124	VPS36	Vps36	9406	-0.251	0.1063	No
125	CLTB	Cltb	9460	-0.261	0.1045	No
126	GRK2	Grk2	9477	-0.266	0.1052	No
127	DNM1L	Dnm1l	9588	-0.288	0.0998	No
128	EPN2	Epn2	9941	-0.363	0.0792	No
129	RBSN	Rbsn	10078	-0.385	0.0728	No
130	CHMP2A	Chmp2a	10092	-0.388	0.0745	No
131	EHD1	Ehd1	10202	-0.416	0.0700	No
132	EPS15	Eps15	10795	-0.477	0.0345	No
133	ARFGAP2	Arfgap2	10808	-0.481	0.0368	No
134	VPS45	Vps45	10907	-0.496	0.0336	No
135	ITCH	Itch	10961	-0.501	0.0333	No
136	EHD2	Ehd2	10978	-0.505	0.0355	No
137	AP2A2	Ap2a2	11213	-0.550	0.0238	No
138	SH3GL1	Sh3gl1	11281	-0.565	0.0230	No
139	CSF1R	Csf1r	11434	-0.598	0.0169	No
140	RAB4A	Rab4a	12117	-0.789	-0.0225	No
141	NEDD4	Nedd4	12230	-0.815	-0.0246	No
142	NTRK1	Ntrk1	12360	-0.851	-0.0275	No
143	PRKCI	Prkci	12533	-0.887	-0.0331	No
144	GRK1	Grk1	12967	-1.031	-0.0547	No
145	RUFY1	Rufy1	13095	-1.092	-0.0560	No
146	CHMP6	Chmp6	13208	-1.135	-0.0561	No
147	GRK6	Grk6	13267	-1.170	-0.0524	No
148	EGF	Egf	13295	-1.179	-0.0467	No
149	MET	Met	13331	-1.194	-0.0414	No
150	PSD3	Psd3	13575	-1.327	-0.0487	No
151	ARRB1	Arrb1	13633	-1.357	-0.0438	No
152	DNM1	Dnm1	13645	-1.366	-0.0358	No
153	IL2RB	Il2rb	13717	-1.405	-0.0315	No
154	EHD4	Ehd4	14035	-1.623	-0.0418	No
155	EGFR	Egfr	14212	-1.772	-0.0420	No
156	SH3KBP1	Sh3kbp1	14636	-2.304	-0.0548	No
157	DNM3	Dnm3	14662	-2.359	-0.0415	No
158	HSPA1L	Hspa1l	14668	-2.365	-0.0267	No
159	EPN3	Epn3	14709	-2.426	-0.0139	No
160	PDGFRA	Pdgfra	14799	-2.561	-0.0034	No
161	ARAP3	Arap3	15247	-3.652	-0.0092	No
162	ACAP1	Acap1	15434	-4.284	0.0059	No