Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | preliminary.phenotype.cls#NG_versus_HG.phenotype.cls#NG_versus_HG_repos |
| Phenotype | phenotype.cls#NG_versus_HG_repos |
| Upregulated in class | HG |
| GeneSet | KEGG_GLIOMA |
| Enrichment Score (ES) | -0.41078138 |
| Normalized Enrichment Score (NES) | -1.4097598 |
| Nominal p-value | 0.037366547 |
| FDR q-value | 0.22369288 |
| FWER p-Value | 0.99 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PLCG2 | Plcg2 | 488 | 2.619 | 0.0146 | No | ||
| 2 | PDGFB | Pdgfb | 928 | 2.013 | 0.0217 | No | ||
| 3 | TGFA | Tgfa | 1428 | 1.595 | 0.0176 | No | ||
| 4 | RB1 | Rb1 | 2061 | 1.239 | -0.0014 | No | ||
| 5 | MDM2 | Mdm2 | 2120 | 1.210 | 0.0162 | No | ||
| 6 | SHC1 | Shc1 | 2179 | 1.183 | 0.0333 | No | ||
| 7 | NRAS | Nras | 2446 | 1.065 | 0.0348 | No | ||
| 8 | PLCG1 | Plcg1 | 3156 | 0.826 | 0.0036 | No | ||
| 9 | PRKCG | Prkcg | 3309 | 0.781 | 0.0075 | No | ||
| 10 | BRAF | Braf | 3403 | 0.752 | 0.0147 | No | ||
| 11 | SOS2 | Sos2 | 3744 | 0.664 | 0.0045 | No | ||
| 12 | ARAF | Araf | 3916 | 0.620 | 0.0043 | No | ||
| 13 | MAPK3 | Mapk3 | 4062 | 0.582 | 0.0052 | No | ||
| 14 | IGF1R | Igf1r | 4597 | 0.491 | -0.0206 | No | ||
| 15 | PTEN | Pten | 4601 | 0.490 | -0.0122 | No | ||
| 16 | PIK3CG | Pik3cg | 4998 | 0.436 | -0.0301 | No | ||
| 17 | PIK3CD | Pik3cd | 5153 | 0.402 | -0.0330 | No | ||
| 18 | CALML3 | Calml3 | 5261 | 0.379 | -0.0332 | No | ||
| 19 | CDKN1A | Cdkn1a | 5982 | 0.248 | -0.0754 | No | ||
| 20 | PIK3R5 | Pik3r5 | 6009 | 0.242 | -0.0728 | No | ||
| 21 | CDK4 | Cdk4 | 6067 | 0.233 | -0.0724 | No | ||
| 22 | HRAS | Hras | 6623 | 0.128 | -0.1060 | No | ||
| 23 | AKT2 | Akt2 | 6809 | 0.094 | -0.1163 | No | ||
| 24 | PDGFA | Pdgfa | 6878 | 0.084 | -0.1192 | No | ||
| 25 | KRAS | Kras | 6947 | 0.073 | -0.1224 | No | ||
| 26 | PIK3CA | Pik3ca | 7015 | 0.064 | -0.1256 | No | ||
| 27 | AKT1 | Akt1 | 7265 | 0.031 | -0.1411 | No | ||
| 28 | SOS1 | Sos1 | 7394 | 0.010 | -0.1492 | No | ||
| 29 | CDK6 | Cdk6 | 7454 | 0.001 | -0.1530 | No | ||
| 30 | MAP2K1 | Map2k1 | 8218 | -0.037 | -0.2017 | No | ||
| 31 | MTOR | Mtor | 8717 | -0.129 | -0.2316 | No | ||
| 32 | PIK3CB | Pik3cb | 9089 | -0.193 | -0.2522 | No | ||
| 33 | MAPK1 | Mapk1 | 9564 | -0.283 | -0.2778 | No | ||
| 34 | E2F1 | E2f1 | 10020 | -0.376 | -0.3006 | No | ||
| 35 | GRB2 | Grb2 | 10893 | -0.492 | -0.3483 | No | ||
| 36 | CAMK2A | Camk2a | 11001 | -0.510 | -0.3462 | No | ||
| 37 | E2F3 | E2f3 | 11074 | -0.521 | -0.3417 | No | ||
| 38 | AKT3 | Akt3 | 11086 | -0.522 | -0.3332 | No | ||
| 39 | RAF1 | Raf1 | 11211 | -0.549 | -0.3316 | No | ||
| 40 | CALM1 | Calm1 | 11439 | -0.599 | -0.3357 | No | ||
| 41 | TP53 | Trp53 | 11831 | -0.708 | -0.3485 | No | ||
| 42 | CALM3 | Calm3 | 12542 | -0.891 | -0.3787 | No | ||
| 43 | PIK3R1 | Pik3r1 | 13040 | -1.061 | -0.3921 | Yes | ||
| 44 | EGF | Egf | 13295 | -1.179 | -0.3877 | Yes | ||
| 45 | PRKCA | Prkca | 13464 | -1.260 | -0.3764 | Yes | ||
| 46 | CALM2 | Calm2 | 13521 | -1.294 | -0.3572 | Yes | ||
| 47 | CAMK2G | Camk2g | 13828 | -1.470 | -0.3510 | Yes | ||
| 48 | E2F2 | E2f2 | 14180 | -1.744 | -0.3430 | Yes | ||
| 49 | PDGFRB | Pdgfrb | 14200 | -1.757 | -0.3132 | Yes | ||
| 50 | EGFR | Egfr | 14212 | -1.772 | -0.2827 | Yes | ||
| 51 | SHC4 | Shc4 | 14252 | -1.803 | -0.2534 | Yes | ||
| 52 | CCND1 | Ccnd1 | 14426 | -2.005 | -0.2293 | Yes | ||
| 53 | SHC3 | Shc3 | 14744 | -2.492 | -0.2058 | Yes | ||
| 54 | PDGFRA | Pdgfra | 14799 | -2.561 | -0.1642 | Yes | ||
| 55 | IGF1 | Igf1 | 15103 | -3.222 | -0.1270 | Yes | ||
| 56 | CAMK2B | Camk2b | 15419 | -4.225 | -0.0729 | Yes | ||
| 57 | PRKCB | Prkcb | 15495 | -4.518 | 0.0019 | Yes |
