Details for gene set KEGG_GLYCEROPHOSPHOLIPID_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_HG.phenotype.cls#NG_versus_HG_repos
Phenotype	phenotype.cls#NG_versus_HG_repos
Upregulated in class	NG
GeneSet	KEGG_GLYCEROPHOSPHOLIPID_METABOLISM
Enrichment Score (ES)	0.45967278
Normalized Enrichment Score (NES)	1.6561913
Nominal p-value	0.0
FDR q-value	0.08117229
FWER p-Value	0.344

Fig 1: Enrichment plot: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDS1	Cds1			23	4.472	0.0661	Yes
2	PLA2G2E	Pla2g2e			35	4.276	0.1300	Yes
3	CHKA	Chka			574	2.477	0.1326	Yes
4	DGKQ	Dgkq			640	2.370	0.1642	Yes
5	GPAT3	Gpat3			750	2.242	0.1910	Yes
6	DGKH	Dgkh			1111	1.847	0.1956	Yes
7	PCYT2	Pcyt2			1156	1.806	0.2201	Yes
8	MBOAT2	Mboat2			1390	1.624	0.2296	Yes
9	PCYT1B	Pcyt1b			1417	1.603	0.2521	Yes
10	PLD2	Pld2			1523	1.535	0.2685	Yes
11	PLD1	Pld1			1533	1.529	0.2910	Yes
12	PLA2G3	Pla2g3			1603	1.482	0.3089	Yes
13	PLA2G12A	Pla2g12a			1631	1.467	0.3294	Yes
14	CDS2	Cds2			1650	1.454	0.3502	Yes
15	LPCAT3	Lpcat3			1704	1.419	0.3682	Yes
16	PCYT1A	Pcyt1a			1922	1.306	0.3739	Yes
17	LCAT	Lcat			1925	1.304	0.3934	Yes
18	ETNK2	Etnk2			1947	1.292	0.4116	Yes
19	PLPP2	Plpp2			2333	1.116	0.4036	Yes
20	ADPRM	Adprm			2366	1.104	0.4182	Yes
21	PISD	Pisd			2525	1.033	0.4236	Yes
22	GPD1	Gpd1			2703	0.965	0.4267	Yes
23	PHOSPHO1	Phospho1			2721	0.961	0.4401	Yes
24	LYPLA2	Lypla2			2853	0.914	0.4454	Yes
25	PLA2G4A	Pla2g4a			2908	0.894	0.4555	Yes
26	PLA2G12B	Pla2g12b			3044	0.857	0.4597	Yes
27	PLPP1	Plpp1			3483	0.733	0.4424	No
28	GPAT2	Gpat2			3584	0.705	0.4466	No
29	DGKD	Dgkd			3627	0.692	0.4543	No
30	AGPAT1	Agpat1			3914	0.620	0.4452	No
31	CDIPT	Cdipt			3997	0.600	0.4490	No
32	MBOAT7	Mboat7			4698	0.469	0.4108	No
33	PLA2G10	Pla2g10			4821	0.443	0.4096	No
34	PEMT	Pemt			5119	0.410	0.3965	No
35	ACHE	Ache			5659	0.308	0.3663	No
36	TAZ	Taz			5900	0.263	0.3548	No
37	PLA2G15	Pla2g15			5950	0.253	0.3554	No
38	AGPAT2	Agpat2			6206	0.208	0.3421	No
39	CHPT1	Chpt1			6330	0.185	0.3369	No
40	PTDSS1	Ptdss1			6505	0.150	0.3279	No
41	LPGAT1	Lpgat1			6651	0.124	0.3204	No
42	AGPAT3	Agpat3			6997	0.066	0.2991	No
43	GPD1L	Gpd1l			7225	0.036	0.2850	No
44	PLA2G4E	Pla2g4e			7297	0.027	0.2808	No
45	PLA2G5	Pla2g5			7963	0.000	0.2377	No
46	GPD2	Gpd2			8171	-0.026	0.2248	No
47	PLA2G6	Pla2g6			8625	-0.112	0.1971	No
48	GPAT4	Gpat4			8770	-0.139	0.1899	No
49	ETNK1	Etnk1			8811	-0.146	0.1895	No
50	DGKI	Dgki			8847	-0.152	0.1896	No
51	PLA2G1B	Pla2g1b			9067	-0.189	0.1783	No
52	PGS1	Pgs1			9082	-0.191	0.1802	No
53	LPCAT4	Lpcat4			9111	-0.199	0.1814	No
54	DGKE	Dgke			9519	-0.275	0.1592	No
55	LYPLA1	Lypla1			9599	-0.291	0.1585	No
56	PTDSS2	Ptdss2			9689	-0.309	0.1575	No
57	PLA2G2D	Pla2g2d			10867	-0.489	0.0887	No
58	DGKZ	Dgkz			11335	-0.575	0.0672	No
59	CRLS1	Crls1			11383	-0.585	0.0730	No
60	LPCAT2	Lpcat2			11624	-0.648	0.0672	No
61	GNPAT	Gnpat			11655	-0.656	0.0752	No
62	AGPAT4	Agpat4			11722	-0.678	0.0812	No
63	GPAM	Gpam			12051	-0.770	0.0716	No
64	DGKA	Dgka			12539	-0.890	0.0535	No
65	LPCAT1	Lpcat1			12608	-0.910	0.0629	No
66	DGKG	Dgkg			12917	-1.016	0.0583	No
67	DGKB	Dgkb			13205	-1.134	0.0569	No
68	LCLAT1	Lclat1			14991	-2.968	-0.0138	No
69	MBOAT1	Mboat1			15092	-3.193	0.0280	No

Fig 2: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYCEROPHOSPHOLIPID_METABOLISM