Details for gene set KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_HG.phenotype.cls#NG_versus_HG_repos
Phenotype	phenotype.cls#NG_versus_HG_repos
Upregulated in class	HG
GeneSet	KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM
Enrichment Score (ES)	-0.6291426
Normalized Enrichment Score (NES)	-1.611903
Nominal p-value	0.017110266
FDR q-value	0.055067413
FWER p-Value	0.548

Fig 1: Enrichment plot: KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HAO2	Hao2			4840	0.443	-0.2787	No
2	PGP	Pgp			6925	0.075	-0.4074	No
3	ACO1	Aco1			6977	0.069	-0.4055	No
4	MDH1	Mdh1			8176	-0.027	-0.4806	No
5	CS	Cs			9083	-0.191	-0.5246	No
6	MTHFD2L	Mthfd2l			9101	-0.196	-0.5110	No
7	MDH2	Mdh2			9361	-0.242	-0.5094	No
8	GLYCTK	Glyctk			10620	-0.443	-0.5572	No
9	ACO2	Aco2			11737	-0.683	-0.5777	Yes
10	AFMID	Afmid			11930	-0.738	-0.5345	Yes
11	MTHFD2	Mthfd2			11955	-0.745	-0.4799	Yes
12	MTHFD1L	Mthfd1l			12565	-0.896	-0.4516	Yes
13	HYI	Hyi			13138	-1.108	-0.4050	Yes
14	GRHPR	Grhpr			13487	-1.270	-0.3317	Yes
15	MTHFD1	Mthfd1			14236	-1.789	-0.2451	Yes
16	HAO1	Hao1			15450	-4.355	0.0048	Yes

Fig 2: KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM