Details for gene set KEGG_ENDOCYTOSIS[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_LG.phenotype.cls#NG_versus_LG_repos
Phenotype	phenotype.cls#NG_versus_LG_repos
Upregulated in class	NG
GeneSet	KEGG_ENDOCYTOSIS
Enrichment Score (ES)	0.34135932
Normalized Enrichment Score (NES)	1.5615089
Nominal p-value	0.0
FDR q-value	0.2085835
FWER p-Value	0.6

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KDR	Kdr	4	4.063	0.0359	Yes
2	CXCR4	Cxcr4	44	2.984	0.0598	Yes
3	CXCR2	Cxcr2	188	2.261	0.0706	Yes
4	VPS25	Vps25	235	2.144	0.0867	Yes
5	RAB11FIP4	Rab11fip4	273	2.060	0.1026	Yes
6	ASAP3	Asap3	326	1.945	0.1165	Yes
7	LDLR	Ldlr	330	1.936	0.1335	Yes
8	GRK4	Grk4	406	1.785	0.1445	Yes
9	ARAP2	Arap2	410	1.779	0.1601	Yes
10	CHMP4C	Chmp4c	415	1.772	0.1756	Yes
11	RET	Ret	436	1.745	0.1898	Yes
12	CBLB	Cblb	457	1.718	0.2037	Yes
13	PIKFYVE	Pikfyve	492	1.680	0.2165	Yes
14	SH3GL2	Sh3gl2	544	1.631	0.2276	Yes
15	HSPA8	Hspa8	581	1.581	0.2393	Yes
16	EHD3	Ehd3	741	1.444	0.2418	Yes
17	ARAP1	Arap1	788	1.416	0.2514	Yes
18	TRAF6	Traf6	1022	1.254	0.2474	Yes
19	GIT1	Git1	1071	1.224	0.2551	Yes
20	SH3GL3	Sh3gl3	1099	1.215	0.2642	Yes
21	STAM	Stam	1138	1.193	0.2723	Yes
22	CLTC	Cltc	1190	1.168	0.2794	Yes
23	PRKCZ	Prkcz	1197	1.165	0.2893	Yes
24	SMURF1	Smurf1	1276	1.126	0.2943	Yes
25	CHMP1B	Chmp1b	1517	1.031	0.2878	Yes
26	MDM2	Mdm2	1537	1.023	0.2956	Yes
27	CBL	Cbl	1669	0.972	0.2958	Yes
28	PIP4K2B	Pip4k2b	1748	0.947	0.2991	Yes
29	PSD2	Psd2	1765	0.943	0.3064	Yes
30	PIP5K1B	Pip5k1b	1812	0.928	0.3117	Yes
31	IGF1R	Igf1r	1949	0.884	0.3107	Yes
32	GIT2	Git2	2076	0.853	0.3101	Yes
33	RNF41	Rnf41	2192	0.817	0.3098	Yes
34	RAB31	Rab31	2253	0.801	0.3131	Yes
35	FLT1	Flt1	2429	0.749	0.3083	Yes
36	HGS	Hgs	2500	0.734	0.3103	Yes
37	PLD1	Pld1	2647	0.700	0.3070	Yes
38	PLD2	Pld2	2654	0.698	0.3128	Yes
39	IQSEC1	Iqsec1	2763	0.677	0.3118	Yes
40	RABEP1	Rabep1	2766	0.676	0.3177	Yes
41	STAM2	Stam2	2816	0.667	0.3204	Yes
42	AGAP2	Agap2	2842	0.661	0.3247	Yes
43	SH3GLB1	Sh3glb1	2892	0.649	0.3273	Yes
44	VPS37D	Vps37d	2912	0.646	0.3318	Yes
45	RAB11FIP1	Rab11fip1	2925	0.644	0.3367	Yes
46	VPS37A	Vps37a	2942	0.641	0.3414	Yes
47	PIP5K1A	Pip5k1a	3137	0.604	0.3341	No
48	ASAP2	Asap2	3370	0.558	0.3240	No
49	STAMBP	Stambp	3392	0.553	0.3275	No
50	KIT	Kit	3495	0.536	0.3256	No
51	RAB11FIP5	Rab11fip5	3520	0.532	0.3288	No
52	SMAP1	Smap1	3527	0.531	0.3331	No
53	ADRB2	Adrb2	3619	0.518	0.3318	No
54	ARFGAP3	Arfgap3	3710	0.502	0.3304	No
55	RAB11B	Rab11b	3731	0.501	0.3336	No
56	VPS4B	Vps4b	3856	0.493	0.3299	No
57	RAB22A	Rab22a	3898	0.487	0.3315	No
58	PARD6G	Pard6g	3938	0.479	0.3332	No
59	GRK3	Grk3	4129	0.443	0.3248	No
60	ERBB4	Erbb4	4142	0.443	0.3280	No
61	EEA1	Eea1	4225	0.439	0.3265	No
62	IQSEC3	Iqsec3	4307	0.438	0.3251	No
63	AP2A1	Ap2a1	4325	0.433	0.3279	No
64	VPS37B	Vps37b	4332	0.432	0.3313	No
65	PSD4	Psd4	4375	0.425	0.3324	No
66	TSG101	Tsg101	4398	0.421	0.3347	No
67	EGF	Egf	4618	0.387	0.3239	No
68	CHMP2B	Chmp2b	4648	0.382	0.3254	No
69	ASAP1	Asap1	4673	0.379	0.3272	No
70	HSPA2	Hspa2	4685	0.377	0.3298	No
71	DNAJC6	Dnajc6	4691	0.377	0.3328	No
72	RAB11A	Rab11a	4725	0.372	0.3340	No
73	RAB11FIP3	Rab11fip3	4731	0.370	0.3370	No
74	ACAP2	Acap2	4936	0.334	0.3267	No
75	SMURF2	Smurf2	5030	0.321	0.3235	No
76	USP8	Usp8	5092	0.314	0.3223	No
77	RAB5A	Rab5a	5193	0.297	0.3184	No
78	RAB11FIP2	Rab11fip2	5204	0.295	0.3204	No
79	CLTA	Clta	5390	0.270	0.3107	No
80	FGFR4	Fgfr4	5434	0.264	0.3103	No
81	NEDD4L	Nedd4l	5482	0.257	0.3095	No
82	RAB5B	Rab5b	5510	0.253	0.3100	No
83	PARD6A	Pard6a	5512	0.252	0.3122	No
84	SRC	Src	5536	0.248	0.3129	No
85	VPS37C	Vps37c	5615	0.236	0.3099	No
86	PIP5K1C	Pip5k1c	5770	0.215	0.3018	No
87	PSD	Psd	5795	0.211	0.3021	No
88	CHMP4B	Chmp4b	5919	0.189	0.2958	No
89	EPN2	Epn2	5938	0.187	0.2963	No
90	IQSEC2	Iqsec2	6004	0.177	0.2936	No
91	DAB2	Dab2	6125	0.159	0.2872	No
92	MVB12A	Mvb12a	6141	0.158	0.2876	No
93	AGAP1	Agap1	6228	0.145	0.2833	No
94	ARRB1	Arrb1	6234	0.145	0.2843	No
95	PARD3	Pard3	6640	0.086	0.2587	No
96	CBLC	Cblc	6672	0.082	0.2574	No
97	SMAP2	Smap2	6747	0.076	0.2533	No
98	MVB12B	Mvb12b	6793	0.069	0.2510	No
99	CHMP5	Chmp5	6890	0.056	0.2452	No
100	F2R	F2r	6893	0.056	0.2456	No
101	TFRC	Tfrc	7030	0.038	0.2371	No
102	AP2B1	Ap2b1	7036	0.037	0.2371	No
103	SH3GLB2	Sh3glb2	7103	0.029	0.2330	No
104	FGFR2	Fgfr2	7193	0.016	0.2274	No
105	ARFGAP1	Arfgap1	7273	0.005	0.2223	No
106	NEDD4	Nedd4	7894	-0.007	0.1820	No
107	EPN1	Epn1	8095	-0.037	0.1693	No
108	FGFR3	Fgfr3	8140	-0.045	0.1668	No
109	GRK2	Grk2	8378	-0.079	0.1521	No
110	CDC42	Cdc42	8435	-0.086	0.1492	No
111	PARD6B	Pard6b	8446	-0.088	0.1493	No
112	GRK5	Grk5	8781	-0.133	0.1288	No
113	RBSN	Rbsn	8892	-0.150	0.1230	No
114	VTA1	Vta1	8913	-0.153	0.1230	No
115	PSD3	Psd3	8936	-0.157	0.1230	No
116	SNF8	Snf8	9031	-0.173	0.1184	No
117	ERBB3	Erbb3	9147	-0.188	0.1126	No
118	DNM1L	Dnm1l	9165	-0.191	0.1132	No
119	EPS15	Eps15	9176	-0.192	0.1142	No
120	ITCH	Itch	9216	-0.198	0.1135	No
121	RAB5C	Rab5c	9243	-0.203	0.1136	No
122	ARFGAP2	Arfgap2	9252	-0.204	0.1149	No
123	AP2S1	Ap2s1	9554	-0.252	0.0975	No
124	ARRB2	Arrb2	9750	-0.281	0.0873	No
125	DNM2	Dnm2	9945	-0.317	0.0775	No
126	ACAP3	Acap3	10001	-0.325	0.0768	No
127	VPS36	Vps36	10009	-0.326	0.0793	No
128	SH3GL1	Sh3gl1	10124	-0.344	0.0749	No
129	LDLRAP1	Ldlrap1	10290	-0.370	0.0674	No
130	VPS45	Vps45	10320	-0.374	0.0689	No
131	ARF6	Arf6	10432	-0.395	0.0652	No
132	CHMP2A	Chmp2a	10615	-0.408	0.0570	No
133	MET	Met	10971	-0.436	0.0377	No
134	RAB4A	Rab4a	11055	-0.453	0.0363	No
135	AP2M1	Ap2m1	11134	-0.466	0.0354	No
136	VPS28	Vps28	11158	-0.472	0.0381	No
137	AP2A2	Ap2a2	11307	-0.490	0.0328	No
138	EHD2	Ehd2	11438	-0.509	0.0289	No
139	ADRB1	Adrb1	11439	-0.509	0.0334	No
140	RUFY1	Rufy1	11575	-0.531	0.0293	No
141	EHD1	Ehd1	11599	-0.535	0.0326	No
142	WWP1	Wwp1	11667	-0.549	0.0331	No
143	CSF1R	Csf1r	11735	-0.562	0.0338	No
144	SH3KBP1	Sh3kbp1	11977	-0.607	0.0235	No
145	DNM1	Dnm1	12160	-0.651	0.0174	No
146	HRAS	Hras	12226	-0.666	0.0191	No
147	PRKCI	Prkci	12555	-0.742	0.0043	No
148	CLTB	Cltb	12792	-0.801	-0.0039	No
149	IL2RA	Il2ra	13084	-0.863	-0.0152	No
150	CHMP6	Chmp6	13224	-0.904	-0.0162	No
151	PDGFRA	Pdgfra	13352	-0.947	-0.0160	No
152	GRK1	Grk1	13398	-0.960	-0.0104	No
153	GRK6	Grk6	13935	-1.167	-0.0350	No
154	EGFR	Egfr	13968	-1.184	-0.0265	No
155	ACAP1	Acap1	14190	-1.314	-0.0292	No
156	IL2RB	Il2rb	14327	-1.401	-0.0256	No
157	HSPA1L	Hspa1l	14505	-1.535	-0.0235	No
158	EHD4	Ehd4	14731	-1.740	-0.0227	No
159	DNM3	Dnm3	14734	-1.740	-0.0074	No
160	EPN3	Epn3	15002	-2.144	-0.0057	No
161	ARAP3	Arap3	15021	-2.181	0.0125	No
162	NTRK1	Ntrk1	15064	-2.274	0.0300	No