Details for gene set KEGG_GLYCEROPHOSPHOLIPID_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_LG.phenotype.cls#NG_versus_LG_repos
Phenotype	phenotype.cls#NG_versus_LG_repos
Upregulated in class	NG
GeneSet	KEGG_GLYCEROPHOSPHOLIPID_METABOLISM
Enrichment Score (ES)	0.36259297
Normalized Enrichment Score (NES)	1.4063255
Nominal p-value	0.020408163
FDR q-value	0.26614383
FWER p-Value	0.929

Fig 1: Enrichment plot: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDS1	Cds1			32	3.129	0.0755	Yes
2	PCYT2	Pcyt2			244	2.125	0.1146	Yes
3	CHKA	Chka			491	1.680	0.1404	Yes
4	PLA2G3	Pla2g3			527	1.644	0.1789	Yes
5	DGKQ	Dgkq			557	1.616	0.2171	Yes
6	PCYT1B	Pcyt1b			782	1.422	0.2378	Yes
7	DGKH	Dgkh			927	1.322	0.2613	Yes
8	MBOAT2	Mboat2			1223	1.150	0.2707	Yes
9	GPD1	Gpd1			1328	1.106	0.2915	Yes
10	LPCAT3	Lpcat3			1372	1.088	0.3157	Yes
11	DGKD	Dgkd			1382	1.086	0.3420	Yes
12	GPAT3	Gpat3			1469	1.047	0.3624	Yes
13	CDS2	Cds2			1900	0.900	0.3569	Yes
14	ADPRM	Adprm			2283	0.790	0.3518	Yes
15	PLD1	Pld1			2647	0.700	0.3457	Yes
16	PLD2	Pld2			2654	0.698	0.3626	Yes
17	GPAT2	Gpat2			2988	0.632	0.3567	No
18	LYPLA2	Lypla2			3620	0.518	0.3288	No
19	DGKA	Dgka			3655	0.513	0.3393	No
20	PHOSPHO1	Phospho1			4715	0.373	0.2800	No
21	PLA2G4A	Pla2g4a			4759	0.366	0.2863	No
22	PLPP2	Plpp2			5264	0.287	0.2608	No
23	CHPT1	Chpt1			5448	0.262	0.2555	No
24	MBOAT7	Mboat7			5518	0.252	0.2573	No
25	PCYT1A	Pcyt1a			5547	0.246	0.2616	No
26	PLA2G12B	Pla2g12b			5923	0.189	0.2420	No
27	ETNK1	Etnk1			6271	0.139	0.2230	No
28	ACHE	Ache			6287	0.138	0.2254	No
29	AGPAT1	Agpat1			6425	0.117	0.2195	No
30	PLA2G10	Pla2g10			6585	0.093	0.2115	No
31	TAZ	Taz			6727	0.078	0.2043	No
32	PLA2G6	Pla2g6			6809	0.067	0.2007	No
33	PGS1	Pgs1			6887	0.057	0.1971	No
34	PLA2G12A	Pla2g12a			6934	0.051	0.1954	No
35	GPD1L	Gpd1l			7298	0.001	0.1720	No
36	PLA2G5	Pla2g5			7784	0.000	0.1406	No
37	PTDSS1	Ptdss1			7855	-0.001	0.1361	No
38	AGPAT2	Agpat2			7986	-0.020	0.1282	No
39	ETNK2	Etnk2			8208	-0.055	0.1153	No
40	AGPAT4	Agpat4			8210	-0.055	0.1166	No
41	PEMT	Pemt			8431	-0.085	0.1044	No
42	GPD2	Gpd2			8448	-0.088	0.1056	No
43	DGKE	Dgke			8474	-0.091	0.1062	No
44	AGPAT3	Agpat3			8562	-0.103	0.1031	No
45	PISD	Pisd			8642	-0.114	0.1009	No
46	LPGAT1	Lpgat1			8769	-0.131	0.0960	No
47	PLA2G1B	Pla2g1b			8850	-0.143	0.0943	No
48	LYPLA1	Lypla1			9017	-0.172	0.0879	No
49	LPCAT2	Lpcat2			9330	-0.217	0.0730	No
50	DGKI	Dgki			9626	-0.262	0.0605	No
51	LCAT	Lcat			9681	-0.271	0.0637	No
52	PTDSS2	Ptdss2			9722	-0.278	0.0680	No
53	GNPAT	Gnpat			9936	-0.315	0.0620	No
54	CDIPT	Cdipt			10270	-0.366	0.0496	No
55	DGKZ	Dgkz			10327	-0.376	0.0553	No
56	PLA2G2E	Pla2g2e			10333	-0.376	0.0643	No
57	PLA2G2D	Pla2g2d			10882	-0.432	0.0395	No
58	PLA2G4E	Pla2g4e			11150	-0.470	0.0339	No
59	PLPP1	Plpp1			11226	-0.482	0.0410	No
60	PLA2G15	Pla2g15			11378	-0.496	0.0435	No
61	DGKB	Dgkb			11906	-0.592	0.0241	No
62	LPCAT4	Lpcat4			11933	-0.598	0.0373	No
63	DGKG	Dgkg			12108	-0.639	0.0419	No
64	GPAM	Gpam			12319	-0.686	0.0453	No
65	CRLS1	Crls1			12376	-0.703	0.0591	No
66	GPAT4	Gpat4			12492	-0.727	0.0697	No
67	LPCAT1	Lpcat1			13344	-0.945	0.0381	No
68	LCLAT1	Lclat1			14491	-1.524	0.0018	No
69	MBOAT1	Mboat1			15197	-2.623	0.0212	No

Fig 2: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYCEROPHOSPHOLIPID_METABOLISM