Details for gene set KEGG_INOSITOL_PHOSPHATE_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_LG.phenotype.cls#NG_versus_LG_repos
Phenotype	phenotype.cls#NG_versus_LG_repos
Upregulated in class	NG
GeneSet	KEGG_INOSITOL_PHOSPHATE_METABOLISM
Enrichment Score (ES)	0.3875925
Normalized Enrichment Score (NES)	1.4827094
Nominal p-value	0.012307692
FDR q-value	0.24889317
FWER p-Value	0.813

Fig 1: Enrichment plot: KEGG_INOSITOL_PHOSPHATE_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PIP4K2C	Pip4k2c			364	1.859	0.0325	Yes
2	PIKFYVE	Pikfyve			492	1.680	0.0749	Yes
3	PIK3C2A	Pik3c2a			686	1.486	0.1072	Yes
4	INPP4A	Inpp4a			730	1.451	0.1481	Yes
5	PLCB2	Plcb2			888	1.342	0.1784	Yes
6	SYNJ1	Synj1			1164	1.181	0.1962	Yes
7	PLCG2	Plcg2			1349	1.099	0.2174	Yes
8	PLCG1	Plcg1			1638	0.987	0.2285	Yes
9	PIP4K2B	Pip4k2b			1748	0.947	0.2500	Yes
10	PIP5K1B	Pip5k1b			1812	0.928	0.2738	Yes
11	PLCB4	Plcb4			2068	0.855	0.2831	Yes
12	INPP5E	Inpp5e			2311	0.783	0.2911	Yes
13	INPPL1	Inppl1			2320	0.781	0.3141	Yes
14	PI4KA	Pi4ka			2526	0.729	0.3228	Yes
15	PIK3CA	Pik3ca			2701	0.689	0.3323	Yes
16	INPP5A	Inpp5a			2924	0.644	0.3373	Yes
17	PIK3C3	Pik3c3			3026	0.624	0.3496	Yes
18	PIP5K1A	Pip5k1a			3137	0.604	0.3607	Yes
19	ISYNA1	Isyna1			3211	0.589	0.3737	Yes
20	INPP5J	Inpp5j			3266	0.577	0.3876	Yes
21	MIOX	Miox			3529	0.531	0.3866	No
22	SYNJ2	Synj2			3850	0.493	0.3808	No
23	INPP5K	Inpp5k			4542	0.399	0.3482	No
24	PI4KB	Pi4kb			5130	0.307	0.3195	No
25	PIK3CG	Pik3cg			5708	0.224	0.2889	No
26	PIP5K1C	Pip5k1c			5770	0.215	0.2915	No
27	PLCE1	Plce1			6133	0.159	0.2729	No
28	PTEN	Pten			6353	0.129	0.2626	No
29	PIK3CD	Pik3cd			6360	0.128	0.2661	No
30	IPMK	Ipmk			6576	0.095	0.2550	No
31	PIP4K2A	Pip4k2a			6690	0.079	0.2501	No
32	PLCD3	Plcd3			7008	0.043	0.2309	No
33	IMPA1	Impa1			7088	0.031	0.2267	No
34	ALDH6A1	Aldh6a1			8249	-0.061	0.1536	No
35	INPP1	Inpp1			8301	-0.067	0.1523	No
36	PLCD1	Plcd1			8453	-0.088	0.1452	No
37	ITPKB	Itpkb			8480	-0.092	0.1463	No
38	PLCB3	Plcb3			8667	-0.117	0.1378	No
39	ITPK1	Itpk1			8940	-0.158	0.1250	No
40	PIK3C2B	Pik3c2b			9051	-0.175	0.1232	No
41	PIK3CB	Pik3cb			9473	-0.238	0.1031	No
42	TPI1	Tpi1			10085	-0.338	0.0738	No
43	IPPK	Ippk			10145	-0.347	0.0805	No
44	INPP5B	Inpp5b			10174	-0.352	0.0893	No
45	CDIPT	Cdipt			10270	-0.366	0.0942	No
46	OCRL	Ocrl			11029	-0.447	0.0586	No
47	MINPP1	Minpp1			11117	-0.464	0.0670	No
48	PLCD4	Plcd4			11232	-0.483	0.0742	No
49	PIK3C2G	Pik3c2g			11701	-0.556	0.0607	No
50	ITPKA	Itpka			13175	-0.892	-0.0076	No
51	INPP4B	Inpp4b			13438	-0.974	0.0048	No
52	IMPA2	Impa2			14965	-2.078	-0.0312	No
53	PLCB1	Plcb1			15046	-2.237	0.0310	No

Fig 2: KEGG_INOSITOL_PHOSPHATE_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_INOSITOL_PHOSPHATE_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_INOSITOL_PHOSPHATE_METABOLISM