Details for gene set KEGG_NOTCH_SIGNALING_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_LG.phenotype.cls#NG_versus_LG_repos
Phenotype	phenotype.cls#NG_versus_LG_repos
Upregulated in class	NG
GeneSet	KEGG_NOTCH_SIGNALING_PATHWAY
Enrichment Score (ES)	0.41130468
Normalized Enrichment Score (NES)	1.4906888
Nominal p-value	0.015723271
FDR q-value	0.26653376
FWER p-Value	0.798

Fig 1: Enrichment plot: KEGG_NOTCH_SIGNALING_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NOTCH3	Notch3			352	1.891	0.0459	Yes
2	DTX3	Dtx3			522	1.649	0.0948	Yes
3	DVL2	Dvl2			626	1.541	0.1441	Yes
4	JAG2	Jag2			740	1.445	0.1893	Yes
5	NOTCH2	Notch2			842	1.375	0.2327	Yes
6	EP300	Ep300			1298	1.118	0.2439	Yes
7	CREBBP	Crebbp			1430	1.067	0.2742	Yes
8	DLL1	Dll1			1550	1.017	0.3034	Yes
9	DLL4	Dll4			1879	0.905	0.3151	Yes
10	ADAM17	Adam17			2356	0.770	0.3123	Yes
11	DLL3	Dll3			2448	0.745	0.3334	Yes
12	JAG1	Jag1			2456	0.742	0.3599	Yes
13	NOTCH1	Notch1			2920	0.644	0.3534	Yes
14	DTX2	Dtx2			2998	0.630	0.3713	Yes
15	NCOR2	Ncor2			3063	0.618	0.3896	Yes
16	NUMB	Numb			3356	0.560	0.3911	Yes
17	DVL3	Dvl3			3363	0.559	0.4110	Yes
18	NCSTN	Ncstn			3649	0.515	0.4113	Yes
19	CIR1	Cir1			4042	0.457	0.4026	No
20	DTX3L	Dtx3l			4397	0.421	0.3950	No
21	NUMBL	Numbl			4613	0.387	0.3952	No
22	MAML1	Maml1			5148	0.304	0.3717	No
23	MAML2	Maml2			5250	0.289	0.3757	No
24	PTCRA	Ptcra			5404	0.268	0.3755	No
25	PSEN1	Psen1			5595	0.239	0.3719	No
26	CTBP1	Ctbp1			6771	0.072	0.2986	No
27	APH1A	Aph1a			7124	0.026	0.2769	No
28	DTX1	Dtx1			7516	0.000	0.2516	No
29	HES5	Hes5			7619	0.000	0.2450	No
30	DVL1	Dvl1			8020	-0.025	0.2201	No
31	DTX4	Dtx4			8164	-0.049	0.2126	No
32	CTBP2	Ctbp2			8700	-0.120	0.1824	No
33	RFNG	Rfng			8786	-0.134	0.1818	No
34	PSEN2	Psen2			9436	-0.232	0.1483	No
35	SNW1	Snw1			9624	-0.262	0.1457	No
36	MAML3	Maml3			9884	-0.305	0.1401	No
37	HES1	Hes1			10067	-0.336	0.1405	No
38	MFNG	Mfng			10427	-0.394	0.1316	No
39	KAT2B	Kat2b			11413	-0.506	0.0864	No
40	HDAC2	Hdac2			11993	-0.613	0.0712	No
41	KAT2A	Kat2a			12473	-0.724	0.0666	No
42	RBPJL	Rbpjl			12558	-0.743	0.0881	No
43	HDAC1	Hdac1			12879	-0.822	0.0973	No
44	RBPJ	Rbpj			13367	-0.953	0.1004	No
45	LFNG	Lfng			13705	-1.071	0.1176	No

Fig 2: KEGG_NOTCH_SIGNALING_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_NOTCH_SIGNALING_PATHWAY: Random ES distribution   
Gene set null distribution of ES for KEGG_NOTCH_SIGNALING_PATHWAY