Details for gene set KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NG_versus_LG.phenotype.cls#NG_versus_LG_repos
Phenotype	phenotype.cls#NG_versus_LG_repos
Upregulated in class	NG
GeneSet	KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM
Enrichment Score (ES)	0.37271592
Normalized Enrichment Score (NES)	1.479455
Nominal p-value	0.0127795525
FDR q-value	0.22826222
FWER p-Value	0.818

Fig 1: Enrichment plot: KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDS1	Cds1			32	3.129	0.0583	Yes
2	ITPR3	Itpr3			315	1.962	0.0779	Yes
3	PIP4K2C	Pip4k2c			364	1.859	0.1107	Yes
4	PIKFYVE	Pikfyve			492	1.680	0.1349	Yes
5	DGKQ	Dgkq			557	1.616	0.1619	Yes
6	PIK3C2A	Pik3c2a			686	1.486	0.1824	Yes
7	INPP4A	Inpp4a			730	1.451	0.2076	Yes
8	PLCB2	Plcb2			888	1.342	0.2233	Yes
9	DGKH	Dgkh			927	1.322	0.2464	Yes
10	SYNJ1	Synj1			1164	1.181	0.2539	Yes
11	PLCG2	Plcg2			1349	1.099	0.2632	Yes
12	DGKD	Dgkd			1382	1.086	0.2821	Yes
13	PLCG1	Plcg1			1638	0.987	0.2846	Yes
14	PIP4K2B	Pip4k2b			1748	0.947	0.2959	Yes
15	PIP5K1B	Pip5k1b			1812	0.928	0.3097	Yes
16	ITPR2	Itpr2			1842	0.919	0.3255	Yes
17	CDS2	Cds2			1900	0.900	0.3392	Yes
18	PLCB4	Plcb4			2068	0.855	0.3449	Yes
19	INPP5E	Inpp5e			2311	0.783	0.3444	Yes
20	INPPL1	Inppl1			2320	0.781	0.3589	Yes
21	PI4KA	Pi4ka			2526	0.729	0.3597	Yes
22	PIK3CA	Pik3ca			2701	0.689	0.3618	Yes
23	INPP5A	Inpp5a			2924	0.644	0.3598	Yes
24	PIK3C3	Pik3c3			3026	0.624	0.3653	Yes
25	PIP5K1A	Pip5k1a			3137	0.604	0.3699	Yes
26	INPP5J	Inpp5j			3266	0.577	0.3727	Yes
27	DGKA	Dgka			3655	0.513	0.3575	No
28	SYNJ2	Synj2			3850	0.493	0.3545	No
29	INPP5K	Inpp5k			4542	0.399	0.3175	No
30	CALML3	Calml3			4796	0.359	0.3080	No
31	PI4KB	Pi4kb			5130	0.307	0.2924	No
32	PIK3CG	Pik3cg			5708	0.224	0.2594	No
33	PIP5K1C	Pip5k1c			5770	0.215	0.2596	No
34	PLCE1	Plce1			6133	0.159	0.2392	No
35	PTEN	Pten			6353	0.129	0.2276	No
36	PIK3CD	Pik3cd			6360	0.128	0.2296	No
37	PIP4K2A	Pip4k2a			6690	0.079	0.2099	No
38	PLCD3	Plcd3			7008	0.043	0.1902	No
39	IMPA1	Impa1			7088	0.031	0.1857	No
40	PRKCA	Prkca			8287	-0.065	0.1094	No
41	INPP1	Inpp1			8301	-0.067	0.1099	No
42	PLCD1	Plcd1			8453	-0.088	0.1018	No
43	DGKE	Dgke			8474	-0.091	0.1023	No
44	ITPKB	Itpkb			8480	-0.092	0.1037	No
45	PLCB3	Plcb3			8667	-0.117	0.0939	No
46	ITPK1	Itpk1			8940	-0.158	0.0794	No
47	PIK3R5	Pik3r5			9023	-0.172	0.0774	No
48	PIK3C2B	Pik3c2b			9051	-0.175	0.0790	No
49	PIK3CB	Pik3cb			9473	-0.238	0.0564	No
50	DGKI	Dgki			9626	-0.262	0.0516	No
51	ITPR1	Itpr1			9712	-0.276	0.0515	No
52	IPPK	Ippk			10145	-0.347	0.0302	No
53	INPP5B	Inpp5b			10174	-0.352	0.0352	No
54	CDIPT	Cdipt			10270	-0.366	0.0361	No
55	DGKZ	Dgkz			10327	-0.376	0.0397	No
56	OCRL	Ocrl			11029	-0.447	0.0030	No
57	PLCD4	Plcd4			11232	-0.483	-0.0007	No
58	INPP5D	Inpp5d			11664	-0.549	-0.0180	No
59	PIK3C2G	Pik3c2g			11701	-0.556	-0.0096	No
60	PIK3R1	Pik3r1			11750	-0.565	-0.0019	No
61	DGKB	Dgkb			11906	-0.592	-0.0005	No
62	PRKCG	Prkcg			12036	-0.622	0.0032	No
63	DGKG	Dgkg			12108	-0.639	0.0110	No
64	CALM3	Calm3			12456	-0.718	0.0024	No
65	ITPKA	Itpka			13175	-0.892	-0.0269	No
66	INPP4B	Inpp4b			13438	-0.974	-0.0250	No
67	CALM1	Calm1			13447	-0.977	-0.0067	No
68	CALM2	Calm2			13782	-1.097	-0.0071	No
69	PRKCB	Prkcb			14851	-1.889	-0.0398	No
70	IMPA2	Impa2			14965	-2.078	-0.0070	No
71	PLCB1	Plcb1			15046	-2.237	0.0310	No

Fig 2: KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM: Random ES distribution   
Gene set null distribution of ES for KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM