Details for gene set KEGG_ALLOGRAFT_REJECTION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_HG.phenotype.cls#NGP_versus_HG_repos
Phenotype	phenotype.cls#NGP_versus_HG_repos
Upregulated in class	NGP
GeneSet	KEGG_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.6371269
Normalized Enrichment Score (NES)	1.4888635
Nominal p-value	0.0
FDR q-value	0.38883343
FWER p-Value	0.76

Fig 1: Enrichment plot: KEGG_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD28	Cd28			59	4.203	0.2930	Yes
2	IL4	Il4			1020	2.171	0.3845	Yes
3	TNF	Tnf			1324	1.864	0.4966	Yes
4	FAS	Fas			1454	1.752	0.6120	Yes
5	HLA-DMA	H2-DMa			2407	1.225	0.6371	Yes
6	IL2	Il2			4324	0.639	0.5587	No
7	CD40	Cd40			5238	0.440	0.5310	No
8	IL5	Il5			6226	0.293	0.4880	No
9	CD80	Cd80			7572	0.034	0.4037	No
10	HLA-DOB	H2-Ob			7765	0.000	0.3913	No
11	PRF1	Prf1			7803	0.000	0.3889	No
12	HLA-DQB1	H2-Ab1			7818	0.000	0.3880	No
13	GZMB	Gzmb			8299	-0.057	0.3611	No
14	IL12A	Il12a			10307	-0.418	0.2612	No
15	IL10	Il10			10814	-0.498	0.2638	No
16	FASLG	Fasl			11139	-0.565	0.2828	No

Fig 2: KEGG_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_ALLOGRAFT_REJECTION