Details for gene set KEGG_ARGININE_AND_PROLINE_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_HG.phenotype.cls#NGP_versus_HG_repos
Phenotype	phenotype.cls#NGP_versus_HG_repos
Upregulated in class	HG
GeneSet	KEGG_ARGININE_AND_PROLINE_METABOLISM
Enrichment Score (ES)	-0.48131174
Normalized Enrichment Score (NES)	-1.4768707
Nominal p-value	0.0
FDR q-value	0.15318537
FWER p-Value	0.81

Fig 1: Enrichment plot: KEGG_ARGININE_AND_PROLINE_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MAOA	Maoa			142	3.800	0.0574	No
2	ALDH1B1	Aldh1b1			254	3.401	0.1098	No
3	ALDH4A1	Aldh4a1			1914	1.457	0.0281	No
4	CPS1	Cps1			1954	1.437	0.0508	No
5	SAT1	Sat1			2092	1.364	0.0658	No
6	ARG1	Arg1			2773	1.066	0.0405	No
7	ALDH3A2	Aldh3a2			2800	1.052	0.0573	No
8	CKMT2	Ckmt2			2987	0.984	0.0625	No
9	GLUL	Glul			3171	0.928	0.0669	No
10	ASS1	Ass1			5363	0.426	-0.0671	No
11	ALDH7A1	Aldh7a1			5717	0.370	-0.0835	No
12	AMD1	Amd1			6712	0.196	-0.1442	No
13	NOS2	Nos2			7157	0.108	-0.1710	No
14	P4HA2	P4ha2			7209	0.098	-0.1726	No
15	ARG2	Arg2			7652	0.018	-0.2009	No
16	ALDH9A1	Aldh9a1			7679	0.011	-0.2023	No
17	AOC1	Aoc1			7871	0.000	-0.2147	No
18	NAGS	Nags			8431	-0.082	-0.2494	No
19	DAO	Dao			8969	-0.172	-0.2810	No
20	GOT2	Got2			9750	-0.318	-0.3258	No
21	CKM	Ckm			10074	-0.383	-0.3400	No
22	PRODH2	Prodh2			10355	-0.424	-0.3507	No
23	AGMAT	Agmat			11449	-0.639	-0.4101	No
24	LAP3	Lap3			11623	-0.678	-0.4094	No
25	GOT1	Got1			11962	-0.774	-0.4177	No
26	P4HA1	P4ha1			12165	-0.832	-0.4161	No
27	GLS	Gls			13175	-1.194	-0.4604	Yes
28	PYCR3	Pycrl			13202	-1.209	-0.4409	Yes
29	PYCR1	Pycr1			13286	-1.242	-0.4245	Yes
30	ODC1	Odc1			13553	-1.387	-0.4174	Yes
31	ALDH18A1	Aldh18a1			13563	-1.393	-0.3936	Yes
32	AZIN2	Azin2			13782	-1.529	-0.3809	Yes
33	NOS1	Nos1			13932	-1.641	-0.3618	Yes
34	SMS	Sms			13976	-1.676	-0.3352	Yes
35	SRM	Srm			13993	-1.688	-0.3067	Yes
36	MAOB	Maob			14005	-1.699	-0.2777	Yes
37	SAT2	Sat2			14193	-1.862	-0.2571	Yes
38	GLS2	Gls2			14426	-2.119	-0.2350	Yes
39	OAT	Oat			14477	-2.199	-0.1997	Yes
40	GATM	Gatm			14551	-2.296	-0.1642	Yes
41	CKB	Ckb			14813	-2.712	-0.1336	Yes
42	NOS3	Nos3			14961	-3.019	-0.0902	Yes
43	GAMT	Gamt			14979	-3.075	-0.0375	Yes
44	P4HA3	P4ha3			15334	-4.152	0.0123	Yes

Fig 2: KEGG_ARGININE_AND_PROLINE_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_ARGININE_AND_PROLINE_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_ARGININE_AND_PROLINE_METABOLISM