Details for gene set KEGG_GLYCEROPHOSPHOLIPID_METABOLISM[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_HG.phenotype.cls#NGP_versus_HG_repos
Phenotype	phenotype.cls#NGP_versus_HG_repos
Upregulated in class	NGP
GeneSet	KEGG_GLYCEROPHOSPHOLIPID_METABOLISM
Enrichment Score (ES)	0.36288822
Normalized Enrichment Score (NES)	1.3492635
Nominal p-value	0.19917865
FDR q-value	0.2876003
FWER p-Value	0.899

Fig 1: Enrichment plot: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDS1	Cds1			46	4.242	0.0609	Yes
2	PLA2G2E	Pla2g2e			162	3.725	0.1096	Yes
3	DGKQ	Dgkq			702	2.535	0.1129	Yes
4	CHKA	Chka			880	2.334	0.1367	Yes
5	GPAT3	Gpat3			890	2.323	0.1711	Yes
6	DGKH	Dgkh			1160	2.032	0.1843	Yes
7	PLA2G4A	Pla2g4a			1440	1.760	0.1927	Yes
8	MBOAT2	Mboat2			1544	1.687	0.2115	Yes
9	PLA2G3	Pla2g3			1586	1.650	0.2337	Yes
10	ETNK2	Etnk2			1634	1.620	0.2551	Yes
11	GPAT2	Gpat2			1704	1.581	0.2744	Yes
12	CDS2	Cds2			1952	1.439	0.2801	Yes
13	ADPRM	Adprm			2293	1.271	0.2773	Yes
14	PLD2	Pld2			2328	1.252	0.2939	Yes
15	LCAT	Lcat			2765	1.069	0.2818	Yes
16	PLA2G12A	Pla2g12a			2787	1.061	0.2965	Yes
17	PLPP2	Plpp2			2809	1.049	0.3109	Yes
18	LYPLA2	Lypla2			2887	1.022	0.3213	Yes
19	GPD1	Gpd1			2889	1.021	0.3366	Yes
20	DGKD	Dgkd			3009	0.978	0.3437	Yes
21	PLA2G5	Pla2g5			3454	0.853	0.3278	Yes
22	AGPAT1	Agpat1			3485	0.846	0.3386	Yes
23	PLD1	Pld1			3529	0.830	0.3483	Yes
24	PHOSPHO1	Phospho1			3617	0.812	0.3549	Yes
25	PISD	Pisd			3680	0.794	0.3629	Yes
26	TAZ	Taz			4164	0.681	0.3419	No
27	PCYT1B	Pcyt1b			4232	0.662	0.3475	No
28	MBOAT7	Mboat7			4628	0.562	0.3305	No
29	DGKI	Dgki			4651	0.553	0.3374	No
30	PLA2G10	Pla2g10			4868	0.503	0.3310	No
31	PCYT2	Pcyt2			4996	0.481	0.3300	No
32	CDIPT	Cdipt			5131	0.457	0.3282	No
33	PCYT1A	Pcyt1a			5276	0.433	0.3254	No
34	ACHE	Ache			5409	0.415	0.3231	No
35	PLA2G6	Pla2g6			6232	0.291	0.2744	No
36	PEMT	Pemt			6515	0.232	0.2596	No
37	PLA2G15	Pla2g15			6642	0.207	0.2546	No
38	LPCAT3	Lpcat3			6719	0.195	0.2526	No
39	GPAT4	Gpat4			6727	0.192	0.2550	No
40	AGPAT2	Agpat2			7349	0.069	0.2159	No
41	GPD1L	Gpd1l			7354	0.068	0.2167	No
42	PLA2G1B	Pla2g1b			7489	0.048	0.2087	No
43	PLA2G12B	Pla2g12b			7820	0.000	0.1874	No
44	AGPAT3	Agpat3			8314	-0.059	0.1564	No
45	PTDSS1	Ptdss1			8393	-0.073	0.1524	No
46	CHPT1	Chpt1			8605	-0.112	0.1405	No
47	PTDSS2	Ptdss2			8746	-0.137	0.1335	No
48	LPGAT1	Lpgat1			9152	-0.205	0.1103	No
49	PLPP1	Plpp1			9672	-0.303	0.0813	No
50	PGS1	Pgs1			9811	-0.331	0.0774	No
51	GNPAT	Gnpat			10007	-0.370	0.0704	No
52	LYPLA1	Lypla1			10117	-0.392	0.0692	No
53	LPCAT4	Lpcat4			10599	-0.456	0.0450	No
54	PLA2G2D	Pla2g2d			10756	-0.489	0.0422	No
55	PLA2G4E	Pla2g4e			11004	-0.534	0.0343	No
56	DGKZ	Dgkz			11215	-0.582	0.0295	No
57	GPAM	Gpam			11360	-0.617	0.0295	No
58	DGKE	Dgke			11384	-0.625	0.0374	No
59	CRLS1	Crls1			11678	-0.693	0.0289	No
60	DGKG	Dgkg			11907	-0.757	0.0255	No
61	GPD2	Gpd2			11986	-0.780	0.0322	No
62	AGPAT4	Agpat4			12325	-0.875	0.0236	No
63	LPCAT1	Lpcat1			12334	-0.879	0.0363	No
64	LPCAT2	Lpcat2			12407	-0.903	0.0452	No
65	ETNK1	Etnk1			12415	-0.906	0.0584	No
66	DGKA	Dgka			12762	-1.030	0.0516	No
67	DGKB	Dgkb			13851	-1.578	0.0050	No
68	LCLAT1	Lclat1			15025	-3.191	-0.0228	No
69	MBOAT1	Mboat1			15179	-3.659	0.0224	No

Fig 2: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_GLYCEROPHOSPHOLIPID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for KEGG_GLYCEROPHOSPHOLIPID_METABOLISM