Details for gene set KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_HG.phenotype.cls#NGP_versus_HG_repos
Phenotype	phenotype.cls#NGP_versus_HG_repos
Upregulated in class	HG
GeneSet	KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION
Enrichment Score (ES)	-0.39759076
Normalized Enrichment Score (NES)	-1.5815798
Nominal p-value	0.0
FDR q-value	0.13012269
FWER p-Value	0.413

Fig 1: Enrichment plot: KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EZR	Ezr			616	2.692	0.0113	No
2	TUBB4A	Tubb4a			1435	1.765	-0.0081	No
3	NCK2	Nck2			1656	1.606	0.0082	No
4	TLR4	Tlr4			1958	1.433	0.0159	No
5	CTNNB1	Ctnnb1			2291	1.271	0.0186	No
6	ARHGEF2	Arhgef2			2406	1.225	0.0345	No
7	LY96	Ly96			2426	1.215	0.0563	No
8	HCLS1	Hcls1			2766	1.069	0.0547	No
9	WASL	Wasl			3722	0.784	0.0078	No
10	TUBB1	Tubb1			3870	0.744	0.0125	No
11	TUBB2B	Tubb2b			4214	0.667	0.0030	No
12	FYN	Fyn			5264	0.436	-0.0566	No
13	ARPC1A	Arpc1a			5719	0.369	-0.0789	No
14	TUBAL3	Tubal3			5867	0.356	-0.0816	No
15	ARPC4	Arpc4			6622	0.210	-0.1264	No
16	ARPC5	Arpc5			6673	0.201	-0.1258	No
17	ROCK1	Rock1			7085	0.119	-0.1501	No
18	TUBA3D	Tuba3b			7380	0.064	-0.1679	No
19	TUBB2A	Tubb2a			7582	0.031	-0.1803	No
20	WAS	Was			7646	0.019	-0.1840	No
21	ARPC3	Arpc3			8527	-0.098	-0.2390	No
22	ABL1	Abl1			8739	-0.135	-0.2501	No
23	RHOA	Rhoa			9229	-0.220	-0.2775	No
24	NCK1	Nck1			9609	-0.291	-0.2964	No
25	ARPC2	Arpc2			9632	-0.295	-0.2923	No
26	ARPC1B	Arpc1b			9829	-0.334	-0.2986	No
27	TUBA4A	Tuba4a			9876	-0.345	-0.2950	No
28	YWHAQ	Ywhaq			10023	-0.373	-0.2974	No
29	OCLN	Ocln			10064	-0.382	-0.2927	No
30	CTTN	Cttn			10066	-0.382	-0.2855	No
31	ACTB	Actb			10078	-0.384	-0.2790	No
32	ITGB1	Itgb1			10224	-0.414	-0.2805	No
33	ACTG1	Actg1			10326	-0.421	-0.2790	No
34	ROCK2	Rock2			10537	-0.442	-0.2842	No
35	CDC42	Cdc42			11074	-0.550	-0.3084	No
36	ARPC5L	Arpc5l			11253	-0.591	-0.3087	No
37	TUBA1A	Tuba1a			11389	-0.627	-0.3055	No
38	YWHAZ	Ywhaz			11982	-0.778	-0.3290	No
39	NCL	Ncl			12021	-0.792	-0.3164	No
40	TUBA8	Tuba8			13278	-1.240	-0.3741	Yes
41	CDH1	Cdh1			13373	-1.294	-0.3556	Yes
42	PRKCA	Prkca			13942	-1.648	-0.3610	Yes
43	TUBA1C	Tuba1c			14114	-1.784	-0.3382	Yes
44	TUBB	Tubb5			14134	-1.803	-0.3052	Yes
45	CD14	Cd14			14584	-2.340	-0.2898	Yes
46	TUBB4B	Tubb4b			14616	-2.385	-0.2466	Yes
47	TUBA1B	Tuba1b			14842	-2.768	-0.2086	Yes
48	TLR5	Tlr5			14959	-3.017	-0.1588	Yes
49	KRT18	Krt18			14991	-3.097	-0.1021	Yes
50	TUBB6	Tubb6			14993	-3.101	-0.0433	Yes
51	CLDN1	Cldn1			15319	-4.088	0.0133	Yes

Fig 2: KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION