Details for gene set KEGG_REGULATION_OF_AUTOPHAGY[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_HG.phenotype.cls#NGP_versus_HG_repos
Phenotype	phenotype.cls#NGP_versus_HG_repos
Upregulated in class	NGP
GeneSet	KEGG_REGULATION_OF_AUTOPHAGY
Enrichment Score (ES)	0.52295345
Normalized Enrichment Score (NES)	1.3689747
Nominal p-value	0.0
FDR q-value	0.28866413
FWER p-Value	0.899

Fig 1: Enrichment plot: KEGG_REGULATION_OF_AUTOPHAGY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PRKAA2	Prkaa2			1042	2.148	0.0747	Yes
2	ATG7	Atg7			1097	2.102	0.2100	Yes
3	GABARAP	Gabarap			1122	2.075	0.3455	Yes
4	AC091230.1	Ulk3			1432	1.767	0.4422	Yes
5	ULK1	Ulk1			1761	1.543	0.5230	Yes
6	ATG3	Atg3			3417	0.861	0.4731	No
7	PIK3R4	Pik3r4			3994	0.724	0.4838	No
8	GABARAPL2	Gabarapl2			4859	0.505	0.4614	No
9	PIK3C3	Pik3c3			4970	0.486	0.4864	No
10	ATG4D	Atg4d			5421	0.412	0.4846	No
11	ATG12	Atg12			7589	0.029	0.3468	No
12	BECN2	Gm38100			7993	0.000	0.3208	No
13	GABARAPL1	Gabarapl1			8312	-0.058	0.3041	No
14	ATG4C	Atg4c			8981	-0.173	0.2725	No
15	ATG4A	Atg4a			8997	-0.175	0.2831	No
16	ULK2	Ulk2			9673	-0.303	0.2596	No
17	ATG5	Atg5			10744	-0.488	0.2228	No
18	PRKAA1	Prkaa1			11364	-0.619	0.2238	No
19	ATG4B	Atg4b			11606	-0.674	0.2527	No

Fig 2: KEGG_REGULATION_OF_AUTOPHAGY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_REGULATION_OF_AUTOPHAGY: Random ES distribution   
Gene set null distribution of ES for KEGG_REGULATION_OF_AUTOPHAGY