Details for gene set KEGG_VIBRIO_CHOLERAE_INFECTION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_HG.phenotype.cls#NGP_versus_HG_repos
Phenotype	phenotype.cls#NGP_versus_HG_repos
Upregulated in class	NGP
GeneSet	KEGG_VIBRIO_CHOLERAE_INFECTION
Enrichment Score (ES)	0.374299
Normalized Enrichment Score (NES)	1.4277242
Nominal p-value	0.0
FDR q-value	0.31774378
FWER p-Value	0.856

Fig 1: Enrichment plot: KEGG_VIBRIO_CHOLERAE_INFECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP6V0B	Atp6v0b			516	2.828	0.0124	Yes
2	ATP6V1A	Atp6v1a			679	2.574	0.0435	Yes
3	PLCG2	Plcg2			735	2.492	0.0802	Yes
4	ATP6V0D1	Atp6v0d1			781	2.439	0.1167	Yes
5	ATP6V1D	Atp6v1d			948	2.260	0.1425	Yes
6	ATP6V1B2	Atp6v1b2			1065	2.129	0.1695	Yes
7	ATP6V1C1	Atp6v1c1			1132	2.064	0.1986	Yes
8	ATP6V1F	Atp6v1f			1147	2.051	0.2308	Yes
9	ATP6AP1	Atp6ap1			1377	1.821	0.2455	Yes
10	TCIRG1	Tcirg1			1479	1.737	0.2670	Yes
11	ATP6V1G1	Atp6v1g1			1533	1.696	0.2910	Yes
12	PLCG1	Plcg1			1648	1.613	0.3097	Yes
13	ATP6V0C	Atp6v0c			1653	1.608	0.3354	Yes
14	ATP6V1H	Atp6v1h			1675	1.596	0.3599	Yes
15	ATP6V1E1	Atp6v1e1			1829	1.504	0.3743	Yes
16	PRKCG	Prkcg			2224	1.299	0.3698	No
17	ERO1A	Ero1l			2884	1.023	0.3438	No
18	ATP6V0E1	Atp6v0e			2994	0.981	0.3526	No
19	ATP6V0E2	Atp6v0e2			3180	0.924	0.3556	No
20	PDIA4	Pdia4			4479	0.596	0.2814	No
21	SLC12A2	Slc12a2			5476	0.402	0.2235	No
22	SEC61A2	Sec61a2			6178	0.302	0.1831	No
23	ATP6V0A2	Atp6v0a2			6233	0.291	0.1843	No
24	ADCY3	Adcy3			6455	0.245	0.1740	No
25	ADCY9	Adcy9			6506	0.234	0.1746	No
26	KCNQ1	Kcnq1			7329	0.073	0.1226	No
27	ATP6V1G2	Atp6v1g2			7538	0.039	0.1098	No
28	SEC61B	Gm10320			8925	-0.165	0.0230	No
29	ATP6V0A1	Atp6v0a1			8992	-0.175	0.0215	No
30	KDELR1	Kdelr1			9400	-0.253	-0.0007	No
31	GNAS	Gnas			9554	-0.280	-0.0060	No
32	ACTB	Actb			10078	-0.384	-0.0336	No
33	ACTG1	Actg1			10326	-0.421	-0.0428	No
34	SEC61G	Sec61g			10868	-0.506	-0.0696	No
35	KDELR3	Kdelr3			11760	-0.715	-0.1156	No
36	ARF1	Arf1			11876	-0.751	-0.1109	No
37	TJP1	Tjp1			11958	-0.773	-0.1036	No
38	ATP6V1C2	Atp6v1c2			12423	-0.908	-0.1189	No
39	PRKACB	Prkacb			12518	-0.946	-0.1097	No
40	ATP6V1B1	Atp6v1b1			12852	-1.064	-0.1140	No
41	SEC61A1	Sec61a1			13008	-1.123	-0.1059	No
42	ATP6V0A4	Atp6v0a4			13323	-1.264	-0.1057	No
43	PRKACA	Prkaca			13821	-1.556	-0.1127	No
44	PRKCA	Prkca			13942	-1.648	-0.0938	No
45	KDELR2	Kdelr2			14265	-1.934	-0.0833	No
46	CFTR	Cftr			14279	-1.953	-0.0526	No
47	ATP6V0D2	Atp6v0d2			15082	-3.390	-0.0496	No
48	PRKCB	Prkcb			15515	-4.838	0.0006	No

Fig 2: KEGG_VIBRIO_CHOLERAE_INFECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_VIBRIO_CHOLERAE_INFECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_VIBRIO_CHOLERAE_INFECTION