Details for gene set KEGG_ALLOGRAFT_REJECTION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_LG.phenotype.cls#NGP_versus_LG_repos
Phenotype	phenotype.cls#NGP_versus_LG_repos
Upregulated in class	NGP
GeneSet	KEGG_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.5255127
Normalized Enrichment Score (NES)	1.4553035
Nominal p-value	0.056338027
FDR q-value	0.3985933
FWER p-Value	0.9

Fig 1: Enrichment plot: KEGG_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD28	Cd28			45	3.429	0.2788	Yes
2	TNF	Tnf			615	1.864	0.3953	Yes
3	IL4	Il4			756	1.694	0.5255	Yes
4	HLA-DMA	H2-DMa			3862	0.565	0.3717	No
5	IL5	Il5			4053	0.531	0.4031	No
6	IL10	Il10			4976	0.401	0.3766	No
7	IL2	Il2			5616	0.320	0.3617	No
8	FAS	Fas			7110	0.077	0.2718	No
9	PRF1	Prf1			7677	0.000	0.2353	No
10	CD80	Cd80			8767	-0.136	0.1762	No
11	FASLG	Fasl			9381	-0.224	0.1551	No
12	GZMB	Gzmb			9616	-0.257	0.1611	No
13	HLA-DQB1	H2-Ab1			10483	-0.407	0.1387	No
14	IL12A	Il12a			10526	-0.407	0.1694	No
15	HLA-DOB	H2-Ob			12589	-0.810	0.1030	No
16	CD40	Cd40			13330	-1.049	0.1415	No

Fig 2: KEGG_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_ALLOGRAFT_REJECTION