Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | preliminary.phenotype.cls#NGP_versus_LG.phenotype.cls#NGP_versus_LG_repos |
| Phenotype | phenotype.cls#NGP_versus_LG_repos |
| Upregulated in class | LG |
| GeneSet | KEGG_BASE_EXCISION_REPAIR |
| Enrichment Score (ES) | -0.6783293 |
| Normalized Enrichment Score (NES) | -2.061858 |
| Nominal p-value | 0.0 |
| FDR q-value | 1.6964287E-4 |
| FWER p-Value | 0.001 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PARP4 | Parp4 | 1833 | 1.082 | -0.0892 | No | ||
| 2 | PARP3 | Parp3 | 2905 | 0.772 | -0.1375 | No | ||
| 3 | SMUG1 | Smug1 | 4174 | 0.508 | -0.2057 | No | ||
| 4 | TDG | Tdg | 4218 | 0.499 | -0.1950 | No | ||
| 5 | NEIL1 | Neil1 | 4397 | 0.474 | -0.1937 | No | ||
| 6 | NEIL2 | Neil2 | 4407 | 0.473 | -0.1816 | No | ||
| 7 | APEX1 | Apex1 | 5644 | 0.315 | -0.2529 | No | ||
| 8 | MPG | Mpg | 6601 | 0.160 | -0.3103 | No | ||
| 9 | NTHL1 | Nthl1 | 6763 | 0.130 | -0.3172 | No | ||
| 10 | POLB | Polb | 7305 | 0.048 | -0.3508 | No | ||
| 11 | LIG3 | Lig3 | 8352 | -0.074 | -0.4163 | No | ||
| 12 | POLE4 | Pole4 | 8754 | -0.132 | -0.4386 | No | ||
| 13 | POLL | Poll | 9391 | -0.225 | -0.4736 | No | ||
| 14 | PCNA | Pcna | 11511 | -0.560 | -0.5953 | No | ||
| 15 | XRCC1 | Xrcc1 | 11796 | -0.617 | -0.5970 | No | ||
| 16 | MBD4 | Mbd4 | 12619 | -0.816 | -0.6281 | No | ||
| 17 | APEX2 | Apex2 | 13398 | -1.074 | -0.6495 | Yes | ||
| 18 | PARP2 | Parp2 | 13451 | -1.091 | -0.6235 | Yes | ||
| 19 | OGG1 | Ogg1 | 14223 | -1.474 | -0.6336 | Yes | ||
| 20 | POLD1 | Pold1 | 14287 | -1.514 | -0.5969 | Yes | ||
| 21 | PARP1 | Parp1 | 14361 | -1.575 | -0.5593 | Yes | ||
| 22 | POLE3 | Pole3 | 14552 | -1.771 | -0.5239 | Yes | ||
| 23 | POLD2 | Pold2 | 14805 | -2.019 | -0.4859 | Yes | ||
| 24 | POLE2 | Pole2 | 14892 | -2.125 | -0.4343 | Yes | ||
| 25 | LIG1 | Lig1 | 15114 | -2.595 | -0.3787 | Yes | ||
| 26 | FEN1 | Fen1 | 15200 | -2.865 | -0.3071 | Yes | ||
| 27 | POLE | Pole | 15345 | -3.558 | -0.2207 | Yes | ||
| 28 | UNG | Ung | 15396 | -3.984 | -0.1168 | Yes | ||
| 29 | NEIL3 | Neil3 | 15507 | -4.649 | 0.0012 | Yes |
