Details for gene set KEGG_ENDOCYTOSIS[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_LG.phenotype.cls#NGP_versus_LG_repos
Phenotype	phenotype.cls#NGP_versus_LG_repos
Upregulated in class	NGP
GeneSet	KEGG_ENDOCYTOSIS
Enrichment Score (ES)	0.28017408
Normalized Enrichment Score (NES)	1.2763643
Nominal p-value	0.03618421
FDR q-value	0.5535596
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KDR	Kdr	1	4.319	0.0343	Yes
2	CXCR4	Cxcr4	60	3.308	0.0569	Yes
3	PIP5K1B	Pip5k1b	228	2.492	0.0659	Yes
4	HSPA8	Hspa8	348	2.249	0.0760	Yes
5	RAB11FIP4	Rab11fip4	361	2.240	0.0931	Yes
6	CXCR2	Cxcr2	372	2.220	0.1101	Yes
7	AGAP2	Agap2	390	2.186	0.1264	Yes
8	RET	Ret	397	2.178	0.1433	Yes
9	ASAP3	Asap3	561	1.916	0.1480	Yes
10	PRKCZ	Prkcz	573	1.903	0.1624	Yes
11	CBLB	Cblb	600	1.881	0.1757	Yes
12	EHD3	Ehd3	706	1.749	0.1828	Yes
13	ARAP2	Arap2	752	1.698	0.1934	Yes
14	VPS25	Vps25	778	1.666	0.2050	Yes
15	GIT1	Git1	840	1.620	0.2140	Yes
16	MDM2	Mdm2	859	1.605	0.2256	Yes
17	GRK4	Grk4	907	1.564	0.2350	Yes
18	PIKFYVE	Pikfyve	925	1.543	0.2461	Yes
19	ARAP1	Arap1	1224	1.349	0.2375	Yes
20	CHMP1B	Chmp1b	1294	1.315	0.2435	Yes
21	TRAF6	Traf6	1297	1.313	0.2538	Yes
22	LDLR	Ldlr	1485	1.219	0.2513	Yes
23	SMURF1	Smurf1	1533	1.200	0.2578	Yes
24	STAM	Stam	1635	1.160	0.2605	Yes
25	PARD6G	Pard6g	1653	1.153	0.2686	Yes
26	HGS	Hgs	1913	1.051	0.2601	Yes
27	DNAJC6	Dnajc6	1978	1.029	0.2641	Yes
28	TSG101	Tsg101	2044	0.998	0.2678	Yes
29	VPS37D	Vps37d	2062	0.990	0.2746	Yes
30	CBL	Cbl	2177	0.958	0.2748	Yes
31	RNF41	Rnf41	2387	0.895	0.2683	Yes
32	CLTC	Cltc	2422	0.886	0.2732	Yes
33	SH3GL2	Sh3gl2	2548	0.853	0.2718	Yes
34	DAB2	Dab2	2774	0.803	0.2636	Yes
35	GRK3	Grk3	2815	0.791	0.2673	Yes
36	AGAP1	Agap1	2862	0.782	0.2705	Yes
37	SH3GLB1	Sh3glb1	2872	0.779	0.2761	Yes
38	PSD4	Psd4	3035	0.744	0.2715	Yes
39	VPS37B	Vps37b	3114	0.735	0.2723	Yes
40	IGF1R	Igf1r	3169	0.719	0.2745	Yes
41	VPS37A	Vps37a	3201	0.712	0.2781	Yes
42	STAM2	Stam2	3284	0.695	0.2783	Yes
43	RAB11FIP2	Rab11fip2	3340	0.684	0.2802	Yes
44	SMAP1	Smap1	3442	0.659	0.2788	No
45	RAB11B	Rab11b	3578	0.630	0.2751	No
46	NEDD4L	Nedd4l	3660	0.613	0.2747	No
47	GIT2	Git2	3734	0.595	0.2747	No
48	SH3GL3	Sh3gl3	3757	0.587	0.2779	No
49	IQSEC2	Iqsec2	3850	0.567	0.2764	No
50	CHMP4C	Chmp4c	3894	0.559	0.2781	No
51	VPS4B	Vps4b	4038	0.534	0.2730	No
52	PIP5K1A	Pip5k1a	4047	0.532	0.2768	No
53	MVB12B	Mvb12b	4084	0.525	0.2786	No
54	STAMBP	Stambp	4171	0.509	0.2770	No
55	EEA1	Eea1	4188	0.505	0.2800	No
56	PSD2	Psd2	4254	0.494	0.2797	No
57	VPS37C	Vps37c	4308	0.487	0.2802	No
58	FGFR4	Fgfr4	4586	0.446	0.2657	No
59	IQSEC3	Iqsec3	4654	0.440	0.2648	No
60	SMURF2	Smurf2	4907	0.402	0.2516	No
61	PLD2	Pld2	5060	0.394	0.2449	No
62	PARD6A	Pard6a	5066	0.393	0.2477	No
63	EGF	Egf	5147	0.379	0.2455	No
64	RAB11FIP1	Rab11fip1	5150	0.379	0.2484	No
65	RABEP1	Rabep1	5179	0.374	0.2495	No
66	ERBB4	Erbb4	5316	0.356	0.2435	No
67	RAB22A	Rab22a	5459	0.348	0.2370	No
68	RAB11FIP5	Rab11fip5	5484	0.344	0.2382	No
69	FGFR3	Fgfr3	5529	0.337	0.2380	No
70	CLTA	Clta	5622	0.319	0.2346	No
71	RAB11FIP3	Rab11fip3	5723	0.302	0.2305	No
72	RAB31	Rab31	5791	0.292	0.2284	No
73	SRC	Src	5800	0.291	0.2302	No
74	ASAP1	Asap1	5964	0.265	0.2217	No
75	FGFR2	Fgfr2	6055	0.249	0.2179	No
76	ACAP2	Acap2	6326	0.202	0.2019	No
77	ASAP2	Asap2	6415	0.190	0.1977	No
78	IQSEC1	Iqsec1	6584	0.162	0.1880	No
79	EPN1	Epn1	6615	0.157	0.1873	No
80	PARD3	Pard3	6639	0.152	0.1870	No
81	GRK2	Grk2	6816	0.122	0.1766	No
82	MVB12A	Mvb12a	6857	0.115	0.1749	No
83	USP8	Usp8	6898	0.109	0.1731	No
84	RAB11A	Rab11a	6914	0.107	0.1730	No
85	NEDD4	Nedd4	6942	0.103	0.1721	No
86	PIP5K1C	Pip5k1c	6949	0.102	0.1725	No
87	HSPA2	Hspa2	7011	0.092	0.1693	No
88	PIP4K2B	Pip4k2b	7074	0.082	0.1659	No
89	EPN2	Epn2	7310	0.047	0.1510	No
90	ARFGAP1	Arfgap1	7484	0.021	0.1399	No
91	SMAP2	Smap2	7582	0.006	0.1336	No
92	AP2A1	Ap2a1	7595	0.004	0.1328	No
93	RAB5A	Rab5a	7986	-0.016	0.1076	No
94	PLD1	Pld1	8115	-0.038	0.0996	No
95	CHMP5	Chmp5	8128	-0.039	0.0991	No
96	RAB5B	Rab5b	8319	-0.068	0.0873	No
97	RBSN	Rbsn	8325	-0.069	0.0875	No
98	AP2B1	Ap2b1	8357	-0.074	0.0861	No
99	CHMP2B	Chmp2b	8501	-0.094	0.0775	No
100	VTA1	Vta1	8503	-0.094	0.0782	No
101	FLT1	Flt1	8858	-0.148	0.0563	No
102	SH3GLB2	Sh3glb2	8864	-0.148	0.0572	No
103	PSD3	Psd3	8923	-0.158	0.0547	No
104	TFRC	Tfrc	9075	-0.175	0.0462	No
105	CHMP4B	Chmp4b	9119	-0.183	0.0449	No
106	ARRB2	Arrb2	9191	-0.193	0.0418	No
107	ARFGAP3	Arfgap3	9348	-0.219	0.0334	No
108	CBLC	Cblc	9382	-0.224	0.0330	No
109	EPS15	Eps15	9413	-0.228	0.0329	No
110	ARRB1	Arrb1	9418	-0.229	0.0345	No
111	VPS36	Vps36	9476	-0.238	0.0326	No
112	ADRB2	Adrb2	9486	-0.240	0.0340	No
113	F2R	F2r	9508	-0.244	0.0345	No
114	RAB5C	Rab5c	9655	-0.264	0.0271	No
115	ITCH	Itch	9889	-0.305	0.0144	No
116	SNF8	Snf8	9943	-0.315	0.0135	No
117	RAB4A	Rab4a	10066	-0.334	0.0082	No
118	LDLRAP1	Ldlrap1	10085	-0.337	0.0097	No
119	ARF6	Arf6	10414	-0.398	-0.0085	No
120	PDGFRA	Pdgfra	10452	-0.404	-0.0077	No
121	CDC42	Cdc42	10548	-0.409	-0.0106	No
122	CSF1R	Csf1r	11100	-0.483	-0.0426	No
123	SH3GL1	Sh3gl1	11107	-0.484	-0.0392	No
124	ARFGAP2	Arfgap2	11153	-0.491	-0.0382	No
125	HSPA1L	Hspa1l	11233	-0.503	-0.0393	No
126	AP2S1	Ap2s1	11243	-0.506	-0.0359	No
127	GRK1	Grk1	11255	-0.508	-0.0325	No
128	DNM1L	Dnm1l	11266	-0.510	-0.0291	No
129	VPS45	Vps45	11381	-0.532	-0.0323	No
130	GRK5	Grk5	11405	-0.536	-0.0295	No
131	KIT	Kit	11499	-0.557	-0.0312	No
132	AP2M1	Ap2m1	11622	-0.582	-0.0345	No
133	IL2RA	Il2ra	11767	-0.611	-0.0390	No
134	DNM2	Dnm2	11950	-0.655	-0.0456	No
135	PARD6B	Pard6b	12185	-0.711	-0.0552	No
136	PSD	Psd	12201	-0.713	-0.0505	No
137	ADRB1	Adrb1	12206	-0.714	-0.0450	No
138	IL2RB	Il2rb	12208	-0.715	-0.0394	No
139	MET	Met	12280	-0.733	-0.0382	No
140	ACAP3	Acap3	12620	-0.816	-0.0538	No
141	CHMP2A	Chmp2a	12804	-0.862	-0.0588	No
142	EHD1	Ehd1	12889	-0.886	-0.0572	No
143	SH3KBP1	Sh3kbp1	12983	-0.915	-0.0560	No
144	GRK6	Grk6	13045	-0.938	-0.0525	No
145	HRAS	Hras	13248	-1.014	-0.0576	No
146	ACAP1	Acap1	13376	-1.066	-0.0573	No
147	EHD2	Ehd2	13401	-1.075	-0.0503	No
148	CHMP6	Chmp6	13472	-1.095	-0.0462	No
149	AP2A2	Ap2a2	13503	-1.107	-0.0393	No
150	PRKCI	Prkci	13532	-1.119	-0.0322	No
151	VPS28	Vps28	13548	-1.126	-0.0243	No
152	WWP1	Wwp1	13602	-1.148	-0.0186	No
153	ERBB3	Erbb3	13923	-1.299	-0.0290	No
154	DNM1	Dnm1	14164	-1.438	-0.0332	No
155	RUFY1	Rufy1	14207	-1.464	-0.0243	No
156	DNM3	Dnm3	14456	-1.666	-0.0272	No
157	EGFR	Egfr	14542	-1.757	-0.0187	No
158	CLTB	Cltb	14569	-1.784	-0.0062	No
159	ARAP3	Arap3	14755	-1.964	-0.0026	No
160	EPN3	Epn3	14758	-1.968	0.0129	No
161	NTRK1	Ntrk1	14760	-1.968	0.0285	No
162	EHD4	Ehd4	15133	-2.661	0.0255	No