Details for gene set KEGG_OXIDATIVE_PHOSPHORYLATION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_LG.phenotype.cls#NGP_versus_LG_repos
Phenotype	phenotype.cls#NGP_versus_LG_repos
Upregulated in class	LG
GeneSet	KEGG_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)	-0.4199656
Normalized Enrichment Score (NES)	-1.6175982
Nominal p-value	0.0028409092
FDR q-value	0.054505203
FWER p-Value	0.622

Fig 1: Enrichment plot: KEGG_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP6V0B	Atp6v0b			942	1.535	-0.0421	No
2	ATP6V1A	Atp6v1a			1063	1.452	-0.0319	No
3	ATP6V1B1	Atp6v1b1			1166	1.391	-0.0213	No
4	COX7A2L	Cox7a2l			1253	1.335	-0.0103	No
5	ATP6V1D	Atp6v1d			1346	1.288	-0.0003	No
6	ATP6V1C1	Atp6v1c1			1657	1.152	-0.0061	No
7	ATP6V0D1	Atp6v0d1			1869	1.069	-0.0066	No
8	ATP6V1B2	Atp6v1b2			2082	0.986	-0.0081	No
9	ATP6V0C	Atp6v0c			2308	0.915	-0.0114	No
10	ATP6V1F	Atp6v1f			2695	0.823	-0.0262	No
11	TCIRG1	Tcirg1			2760	0.808	-0.0204	No
12	NDUFA6	Ndufa6			2870	0.780	-0.0178	No
13	COX4I2	Cox4i2			2876	0.778	-0.0085	No
14	ATP6V1E1	Atp6v1e1			3051	0.742	-0.0106	No
15	ATP6V1H	Atp6v1h			3290	0.693	-0.0174	No
16	ATP6AP1	Atp6ap1			3827	0.572	-0.0451	No
17	ATP6V1G1	Atp6v1g1			4391	0.476	-0.0757	No
18	ATP6V0E1	Atp6v0e			4706	0.433	-0.0907	No
19	MT-CO1	mt-Co1			4912	0.401	-0.0990	No
20	MT-ND4L	mt-Nd4l			5400	0.356	-0.1262	No
21	NDUFS2	Ndufs2			6088	0.245	-0.1678	No
22	MT-ND4	mt-Nd4			6515	0.173	-0.1932	No
23	ATP6V0E2	Atp6v0e2			6563	0.165	-0.1943	No
24	ATP4A	Atp4a			6588	0.162	-0.1938	No
25	MT-ND1	mt-Nd1			7022	0.089	-0.2208	No
26	NDUFB2	Ndufb2			7448	0.026	-0.2480	No
27	UQCRFS1	Uqcrfs1			7519	0.017	-0.2524	No
28	ATP12A	Atp12a			7688	0.000	-0.2633	No
29	MT-ATP6	mt-Atp6			7689	0.000	-0.2633	No
30	MT-CO3	mt-Co3			7787	0.000	-0.2696	No
31	COX17	Cox17			7835	0.000	-0.2726	No
32	COX4I1	Cox4i1			8028	-0.025	-0.2848	No
33	MT-ND2	mt-Nd2			8167	-0.045	-0.2931	No
34	MT-ND6	mt-Nd6			8316	-0.068	-0.3019	No
35	MT-ND5	mt-Nd5			8443	-0.086	-0.3090	No
36	MT-CYB	mt-Cytb			8723	-0.128	-0.3255	No
37	NDUFB9	Ndufb9			9475	-0.238	-0.3713	No
38	ATP6V0A2	Atp6v0a2			9527	-0.247	-0.3715	No
39	NDUFB5	Ndufb5			9733	-0.280	-0.3814	No
40	COX6B1	Cox6b1			9788	-0.286	-0.3813	No
41	NDUFA10	Ndufa10			9814	-0.293	-0.3793	No
42	NDUFV1	Ndufv1			9824	-0.293	-0.3763	No
43	COX7B	Cox7b			10104	-0.341	-0.3902	No
44	PPA2	Ppa2			10358	-0.388	-0.4018	No
45	COX7C	Cox7c			10405	-0.397	-0.3998	No
46	COX7B2	Cox7b2			10634	-0.421	-0.4094	No
47	COX7A2	Cox7a2			10704	-0.427	-0.4086	No
48	COX11	Cox11			10832	-0.440	-0.4114	No
49	SDHC	Sdhc			10851	-0.443	-0.4070	No
50	NDUFS3	Ndufs3			10977	-0.465	-0.4094	No
51	MT-CO2	mt-Co2			11133	-0.487	-0.4134	No
52	NDUFB3	Ndufb3			11235	-0.505	-0.4137	Yes
53	COX8C	Cox8b			11277	-0.512	-0.4100	Yes
54	CYC1	Cyc1			11289	-0.515	-0.4044	Yes
55	UQCRC2	Uqcrc2			11303	-0.518	-0.3988	Yes
56	NDUFB1	Ndufb1-ps			11347	-0.526	-0.3951	Yes
57	NDUFS1	Ndufs1			11400	-0.535	-0.3918	Yes
58	ATP5F1C	Atp5c1			11459	-0.548	-0.3888	Yes
59	NDUFB4	Ndufb4			11466	-0.550	-0.3824	Yes
60	NDUFA8	Ndufa8			11633	-0.584	-0.3859	Yes
61	NDUFA1	Ndufa1			11658	-0.590	-0.3801	Yes
62	NDUFB6	Ndufb6			11978	-0.661	-0.3926	Yes
63	COX5A	Cox5a			12040	-0.676	-0.3882	Yes
64	NDUFAB1	Ndufab1			12069	-0.683	-0.3816	Yes
65	ATP6V0A1	Atp6v0a1			12211	-0.715	-0.3819	Yes
66	NDUFA9	Ndufa9			12260	-0.729	-0.3759	Yes
67	NDUFA2	Ndufa2			12284	-0.734	-0.3683	Yes
68	UQCRQ	Uqcrq			12315	-0.742	-0.3611	Yes
69	NDUFS8	Ndufs8			12364	-0.755	-0.3549	Yes
70	ATP5PF	Atp5j			12388	-0.760	-0.3469	Yes
71	NDUFS7	Ndufs7			12392	-0.763	-0.3377	Yes
72	NDUFS6	Ndufs6			12410	-0.765	-0.3293	Yes
73	SDHB	Sdhb			12441	-0.770	-0.3217	Yes
74	ATP4B	Atp4b			12472	-0.778	-0.3140	Yes
75	COX6A2	Cox6a2			12497	-0.785	-0.3058	Yes
76	NDUFA3	Ndufa3			12510	-0.788	-0.2968	Yes
77	ATP5PD	Atp5h			12515	-0.789	-0.2873	Yes
78	ATP5F1A	Atp5a1			12609	-0.813	-0.2833	Yes
79	ATP5F1E	Atp5e			12626	-0.818	-0.2742	Yes
80	NDUFS4	Ndufs4			12711	-0.837	-0.2693	Yes
81	NDUFB7	Ndufb7			12713	-0.838	-0.2589	Yes
82	ATP5MC3	Atp5g3			12728	-0.842	-0.2494	Yes
83	NDUFB10	Ndufb10			12741	-0.845	-0.2397	Yes
84	ATP5F1D	Atp5d			12832	-0.865	-0.2349	Yes
85	COX5B	Cox5b			12858	-0.875	-0.2257	Yes
86	ATP6V1G2	Atp6v1g2			12874	-0.880	-0.2157	Yes
87	ATP6V0D2	Atp6v0d2			12918	-0.895	-0.2074	Yes
88	COX8A	Cox8a			12920	-0.897	-0.1964	Yes
89	UQCRC1	Uqcrc1			12932	-0.902	-0.1859	Yes
90	NDUFA4	Ndufa4			12975	-0.914	-0.1773	Yes
91	UQCRB	Uqcrb			12991	-0.917	-0.1669	Yes
92	NDUFV3	Ndufv3			13106	-0.957	-0.1625	Yes
93	ATP5F1B	Atp5b			13119	-0.961	-0.1514	Yes
94	COX6C	Cox6c			13135	-0.967	-0.1403	Yes
95	ATP5ME	Atp5k			13183	-0.982	-0.1312	Yes
96	ATP5MF	Atp5j2			13185	-0.984	-0.1191	Yes
97	COX6B2	Cox6b2			13229	-1.003	-0.1095	Yes
98	NDUFV2	Ndufv2			13351	-1.057	-0.1042	Yes
99	COX6A1	Cox6a1			13416	-1.080	-0.0950	Yes
100	COX10	Cox10			13621	-1.155	-0.0939	Yes
101	NDUFC1	Ndufc1			13643	-1.161	-0.0809	Yes
102	UQCR10	Uqcr10			13754	-1.211	-0.0730	Yes
103	ATP6V1C2	Atp6v1c2			13993	-1.331	-0.0720	Yes
104	NDUFS5	Ndufs5			14012	-1.341	-0.0565	Yes
105	NDUFA5	Ndufa5			14340	-1.554	-0.0585	Yes
106	COX7A1	Cox7a1			14746	-1.951	-0.0606	Yes
107	NDUFA4L2	Ndufa4l2			14864	-2.080	-0.0424	Yes
108	ATP6V0A4	Atp6v0a4			14944	-2.227	-0.0199	Yes
109	LHPP	Lhpp			14986	-2.306	0.0060	Yes
110	PPA1	Ppa1			15004	-2.332	0.0338	Yes

Fig 2: KEGG_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for KEGG_OXIDATIVE_PHOSPHORYLATION