Datasetpreliminary.phenotype.cls#NGP_versus_NG.phenotype.cls#NGP_versus_NG_repos
Phenotypephenotype.cls#NGP_versus_NG_repos
Upregulated in classNG
GeneSetKEGG_DNA_REPLICATION
Enrichment Score (ES)-0.5408482
Normalized Enrichment Score (NES)-1.7288325
Nominal p-value0.00913242
FDR q-value0.053261224
FWER p-Value0.209
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_DNA_REPLICATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SSBP1Ssbp119160.556-0.0816No
2MCM7Mcm728570.420-0.1105No
3RNASEH2ARnaseh2a32020.385-0.1036No
4POLE4Pole445380.233-0.1721No
5POLD1Pold148790.201-0.1788No
6DNA2Dna255870.139-0.2139No
7RFC2Rfc256390.135-0.2070No
8RFC3Rfc369930.035-0.2917No
9POLE3Pole38342-0.034-0.3761No
10RFC4Rfc48405-0.037-0.3773No
11RNASEH2CRnaseh2c10556-0.196-0.5012No
12MCM2Mcm210802-0.215-0.5008No
13PCNAPcna11055-0.238-0.4990No
14RNASEH2BRnaseh2b11140-0.246-0.4858No
15RPA1Rpa111309-0.262-0.4768No
16RFC1Rfc111362-0.268-0.4599No
17RPA3Rpa311906-0.324-0.4704No
18LIG1Lig112998-0.447-0.5071Yes
19RPA2Rpa213219-0.479-0.4850Yes
20RFC5Rfc513275-0.491-0.4515Yes
21POLE2Pole213760-0.566-0.4400Yes
22PRIM2Prim213795-0.573-0.3989Yes
23FEN1Fen114192-0.659-0.3746Yes
24MCM6Mcm614196-0.661-0.3249Yes
25POLD2Pold214515-0.768-0.2873Yes
26MCM4Mcm414554-0.779-0.2309Yes
27POLEPole14637-0.819-0.1743Yes
28MCM3Mcm314865-0.927-0.1189Yes
29POLA1Pola115040-1.045-0.0511Yes
30MCM5Mcm515094-1.0890.0278Yes
Table: GSEA details [plain text format]



Fig 2: KEGG_DNA_REPLICATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_DNA_REPLICATION: Random ES distribution   
Gene set null distribution of ES for KEGG_DNA_REPLICATION