Details for gene set KEGG_HOMOLOGOUS_RECOMBINATION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_NG.phenotype.cls#NGP_versus_NG_repos
Phenotype	phenotype.cls#NGP_versus_NG_repos
Upregulated in class	NG
GeneSet	KEGG_HOMOLOGOUS_RECOMBINATION
Enrichment Score (ES)	-0.56193036
Normalized Enrichment Score (NES)	-1.6386606
Nominal p-value	0.011160715
FDR q-value	0.072967894
FWER p-Value	0.429

Fig 1: Enrichment plot: KEGG_HOMOLOGOUS_RECOMBINATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MUS81	Mus81			948	0.853	0.0046	No
2	SSBP1	Ssbp1			1916	0.556	-0.0149	No
3	TOP3B	Top3b			3208	0.384	-0.0686	No
4	RAD51D	Rad51d			4224	0.268	-0.1135	No
5	POLD1	Pold1			4879	0.201	-0.1401	No
6	MRE11	Mre11a			4928	0.197	-0.1281	No
7	RAD52	Rad52			5324	0.162	-0.1410	No
8	BRCA2	Brca2			6218	0.089	-0.1917	No
9	RAD51C	Rad51c			7908	-0.003	-0.3004	No
10	TOP3A	Top3a			9707	-0.132	-0.4062	No
11	RPA1	Rpa1			11309	-0.262	-0.4893	No
12	RPA3	Rpa3			11906	-0.324	-0.5027	No
13	XRCC2	Xrcc2			12825	-0.435	-0.5284	Yes
14	NBN	Nbn			13208	-0.478	-0.5162	Yes
15	RPA2	Rpa2			13219	-0.479	-0.4799	Yes
16	XRCC3	Xrcc3			13752	-0.564	-0.4708	Yes
17	RAD51B	Rad51b			14404	-0.729	-0.4566	Yes
18	POLD2	Pold2			14515	-0.768	-0.4045	Yes
19	BLM	Blm			15090	-1.087	-0.3577	Yes
20	EME1	Eme1			15309	-1.397	-0.2641	Yes
21	RAD54L	Rad54l			15415	-1.669	-0.1423	Yes
22	RAD51	Rad51			15473	-1.937	0.0034	Yes

Fig 2: KEGG_HOMOLOGOUS_RECOMBINATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_HOMOLOGOUS_RECOMBINATION: Random ES distribution   
Gene set null distribution of ES for KEGG_HOMOLOGOUS_RECOMBINATION