Details for gene set KEGG_OXIDATIVE_PHOSPHORYLATION[GSEA]

Table: GSEA Results Summary

Dataset	preliminary.phenotype.cls#NGP_versus_NG.phenotype.cls#NGP_versus_NG_repos
Phenotype	phenotype.cls#NGP_versus_NG_repos
Upregulated in class	NG
GeneSet	KEGG_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)	-0.39074227
Normalized Enrichment Score (NES)	-1.5982199
Nominal p-value	0.0048076925
FDR q-value	0.09910084
FWER p-Value	0.563

Fig 1: Enrichment plot: KEGG_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP6V0D2	Atp6v0d2			34	2.462	0.0635	No
2	ATP4A	Atp4a			123	1.864	0.1075	No
3	COX6B2	Cox6b2			984	0.837	0.0740	No
4	COX8C	Cox8b			1280	0.741	0.0747	No
5	COX4I2	Cox4i2			1333	0.734	0.0909	No
6	MT-ND4L	mt-Nd4l			3514	0.356	-0.0410	No
7	ATP6V1G2	Atp6v1g2			4241	0.266	-0.0810	No
8	NDUFA6	Ndufa6			5344	0.161	-0.1482	No
9	UQCRFS1	Uqcrfs1			5418	0.155	-0.1488	No
10	NDUFB2	Ndufb2			5696	0.131	-0.1633	No
11	NDUFA10	Ndufa10			5721	0.129	-0.1614	No
12	CYC1	Cyc1			5740	0.126	-0.1592	No
13	NDUFV1	Ndufv1			5870	0.117	-0.1645	No
14	NDUFS3	Ndufs3			6158	0.093	-0.1806	No
15	COX7A2L	Cox7a2l			6167	0.093	-0.1786	No
16	NDUFB5	Ndufb5			6335	0.082	-0.1873	No
17	TCIRG1	Tcirg1			6458	0.074	-0.1932	No
18	COX10	Cox10			6688	0.057	-0.2066	No
19	ATP6V1C1	Atp6v1c1			6934	0.039	-0.2214	No
20	ATP6V0E2	Atp6v0e2			7120	0.025	-0.2327	No
21	ATP6V0A2	Atp6v0a2			7267	0.014	-0.2418	No
22	NDUFS2	Ndufs2			7378	0.006	-0.2488	No
23	UQCRC2	Uqcrc2			7439	0.002	-0.2526	No
24	ATP12A	Atp12a			7552	0.000	-0.2599	No
25	COX7B2	Cox7b2			7652	0.000	-0.2663	No
26	MT-CO2	mt-Co2			7705	0.000	-0.2697	No
27	ATP4B	Atp4b			7740	0.000	-0.2719	No
28	NDUFA4L2	Ndufa4l2			8009	-0.011	-0.2890	No
29	NDUFS7	Ndufs7			8011	-0.011	-0.2888	No
30	ATP5F1C	Atp5c1			8083	-0.016	-0.2930	No
31	ATP6V1B1	Atp6v1b1			8148	-0.021	-0.2966	No
32	COX6A2	Cox6a2			8390	-0.037	-0.3112	No
33	ATP5F1B	Atp5b			8399	-0.037	-0.3107	No
34	ATP6V1B2	Atp6v1b2			8633	-0.053	-0.3244	No
35	NDUFB9	Ndufb9			8817	-0.066	-0.3345	No
36	NDUFAB1	Ndufab1			9031	-0.081	-0.3462	No
37	NDUFA9	Ndufa9			9127	-0.088	-0.3500	No
38	ATP6V1H	Atp6v1h			9128	-0.088	-0.3476	No
39	PPA1	Ppa1			9295	-0.099	-0.3558	No
40	NDUFS4	Ndufs4			9344	-0.103	-0.3561	No
41	COX5B	Cox5b			9355	-0.103	-0.3540	No
42	SDHC	Sdhc			9435	-0.110	-0.3562	No
43	COX4I1	Cox4i1			9535	-0.118	-0.3595	No
44	ATP5F1A	Atp5a1			9760	-0.135	-0.3704	No
45	LHPP	Lhpp			9857	-0.144	-0.3728	No
46	COX7C	Cox7c			9876	-0.145	-0.3701	No
47	NDUFS1	Ndufs1			9952	-0.151	-0.3710	No
48	COX6B1	Cox6b1			10014	-0.155	-0.3708	No
49	NDUFV2	Ndufv2			10048	-0.157	-0.3687	No
50	MT-ND4	mt-Nd4			10184	-0.167	-0.3730	No
51	PPA2	Ppa2			10458	-0.189	-0.3857	Yes
52	SDHB	Sdhb			10474	-0.190	-0.3816	Yes
53	NDUFB10	Ndufb10			10571	-0.197	-0.3826	Yes
54	ATP6V0B	Atp6v0b			10585	-0.198	-0.3781	Yes
55	NDUFB3	Ndufb3			10631	-0.200	-0.3757	Yes
56	ATP6V0D1	Atp6v0d1			10653	-0.202	-0.3717	Yes
57	NDUFA8	Ndufa8			10676	-0.204	-0.3676	Yes
58	ATP6V1G1	Atp6v1g1			10697	-0.206	-0.3634	Yes
59	ATP6V1D	Atp6v1d			10719	-0.208	-0.3593	Yes
60	COX5A	Cox5a			10781	-0.213	-0.3575	Yes
61	ATP6V1C2	Atp6v1c2			10868	-0.220	-0.3572	Yes
62	COX11	Cox11			11011	-0.233	-0.3602	Yes
63	COX7A2	Cox7a2			11224	-0.255	-0.3672	Yes
64	ATP6V1E1	Atp6v1e1			11322	-0.264	-0.3664	Yes
65	MT-CYB	mt-Cytb			11374	-0.270	-0.3625	Yes
66	UQCRC1	Uqcrc1			11468	-0.278	-0.3611	Yes
67	MT-ND6	mt-Nd6			11587	-0.289	-0.3611	Yes
68	ATP6V1F	Atp6v1f			11684	-0.300	-0.3593	Yes
69	ATP6V0C	Atp6v0c			11721	-0.303	-0.3536	Yes
70	NDUFB1	Ndufb1-ps			11756	-0.306	-0.3476	Yes
71	ATP6V1A	Atp6v1a			11845	-0.317	-0.3448	Yes
72	COX8A	Cox8a			11885	-0.321	-0.3388	Yes
73	UQCRB	Uqcrb			11992	-0.334	-0.3368	Yes
74	ATP5MC3	Atp5g3			12291	-0.365	-0.3463	Yes
75	NDUFB6	Ndufb6			12354	-0.372	-0.3404	Yes
76	NDUFA3	Ndufa3			12359	-0.373	-0.3307	Yes
77	ATP5F1D	Atp5d			12403	-0.379	-0.3234	Yes
78	MT-ND2	mt-Nd2			12428	-0.382	-0.3148	Yes
79	ATP5PD	Atp5h			12479	-0.388	-0.3077	Yes
80	COX7B	Cox7b			12512	-0.392	-0.2993	Yes
81	COX7A1	Cox7a1			12522	-0.394	-0.2894	Yes
82	MT-CO1	mt-Co1			12585	-0.401	-0.2827	Yes
83	MT-ND5	mt-Nd5			12840	-0.436	-0.2875	Yes
84	MT-ATP6	mt-Atp6			12940	-0.443	-0.2821	Yes
85	ATP6AP1	Atp6ap1			13161	-0.471	-0.2838	Yes
86	NDUFB7	Ndufb7			13279	-0.492	-0.2783	Yes
87	MT-CO3	mt-Co3			13320	-0.498	-0.2676	Yes
88	ATP5F1E	Atp5e			13433	-0.508	-0.2613	Yes
89	COX6C	Cox6c			13521	-0.523	-0.2530	Yes
90	NDUFB4	Ndufb4			13601	-0.534	-0.2439	Yes
91	ATP5MF	Atp5j2			13638	-0.539	-0.2318	Yes
92	NDUFS8	Ndufs8			13664	-0.545	-0.2189	Yes
93	ATP6V0E1	Atp6v0e			13708	-0.554	-0.2069	Yes
94	ATP5ME	Atp5k			13714	-0.555	-0.1924	Yes
95	NDUFA1	Ndufa1			13759	-0.566	-0.1802	Yes
96	ATP5PF	Atp5j			13797	-0.573	-0.1673	Yes
97	NDUFS6	Ndufs6			13984	-0.610	-0.1631	Yes
98	NDUFA2	Ndufa2			14058	-0.626	-0.1511	Yes
99	NDUFV3	Ndufv3			14135	-0.645	-0.1388	Yes
100	MT-ND1	mt-Nd1			14152	-0.649	-0.1225	Yes
101	UQCR10	Uqcr10			14215	-0.666	-0.1088	Yes
102	NDUFA4	Ndufa4			14228	-0.671	-0.0917	Yes
103	COX6A1	Cox6a1			14276	-0.686	-0.0764	Yes
104	UQCRQ	Uqcrq			14286	-0.690	-0.0585	Yes
105	NDUFC1	Ndufc1			14306	-0.695	-0.0412	Yes
106	NDUFA5	Ndufa5			14324	-0.701	-0.0236	Yes
107	ATP6V0A4	Atp6v0a4			14633	-0.818	-0.0218	Yes
108	COX17	Cox17			14728	-0.857	-0.0050	Yes
109	NDUFS5	Ndufs5			14975	-0.990	0.0054	Yes
110	ATP6V0A1	Atp6v0a1			15130	-1.131	0.0256	Yes

Fig 2: KEGG_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: KEGG_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for KEGG_OXIDATIVE_PHOSPHORYLATION