DatasetNormalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
PhenotypePhenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in classFSHD2
GeneSetKEGG_LEISHMANIA_INFECTION
Enrichment Score (ES)0.4195675
Normalized Enrichment Score (NES)1.6797646
Nominal p-value0.0031897926
FDR q-value0.16692682
FWER p-Value0.997
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_LEISHMANIA_INFECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FCGR2AENSG00000143226.13251.8190.0763Yes
2TGFB2ENSG00000092969.121521.3170.1289Yes
3TLR4ENSG00000136869.168290.9060.1508Yes
4PTGS2ENSG00000073756.1211050.8370.1795Yes
5FCGR1AENSG00000150337.1315850.7610.2000Yes
6TLR2ENSG00000137462.815990.7590.2318Yes
7MARCKSL1ENSG00000175130.718780.7200.2555Yes
8FCGR3BENSG00000162747.1122050.6830.2765Yes
9IFNGR1ENSG00000027697.1423290.6690.3018Yes
10CR1ENSG00000203710.1131910.5920.3058Yes
11FCGR3AENSG00000203747.1133290.5820.3271Yes
12IL1BENSG00000125538.1234300.5720.3489Yes
13MAPK13ENSG00000156711.1738330.5470.3622Yes
14MAPK12ENSG00000188130.1439880.5400.3813Yes
15IL1AENSG00000115008.542740.5260.3966Yes
16HLA-DQB1ENSG00000179344.1646310.5120.4096Yes
17IL12BENSG00000113302.450680.4860.4196Yes
18MYD88ENSG00000172936.14107430.3010.2942No
19HLA-DQA2ENSG00000237541.4112200.2850.2947No
20C3ENSG00000125730.17131150.2350.2585No
21NOS2ENSG00000007171.18150030.1730.2199No
22HLA-DRAENSG00000204287.14160280.1440.2011No
23TAB1ENSG00000100324.14160960.1430.2055No
24IRAK1ENSG00000184216.14166730.1260.1968No
25IFNGR2ENSG00000159128.14169120.1190.1961No
26IL4ENSG00000113520.11172630.1100.1922No
27FOSENSG00000170345.10179330.0920.1799No
28ITGAMENSG00000169896.18188940.0680.1594No
29ELK1ENSG00000126767.18189090.0680.1619No
30NFKB1ENSG00000109320.13192180.0590.1569No
31HLA-DRB5ENSG00000198502.6192230.0590.1593No
32JAK2ENSG00000096968.13192350.0580.1615No
33MAPK11ENSG00000185386.15197820.0440.1501No
34TGFB3ENSG00000119699.7203640.0290.1372No
35PTPN6ENSG00000111679.17208320.0170.1265No
36ITGA4ENSG00000115232.14208550.0160.1267No
37TNFENSG00000232810.421705-0.0060.1063No
38CYBAENSG00000051523.1121714-0.0070.1063No
39NFKBIAENSG00000100906.1022848-0.0350.0802No
40MAPK3ENSG00000102882.1223490-0.0520.0668No
41RELAENSG00000173039.1923632-0.0560.0658No
42IRAK4ENSG00000198001.1323681-0.0570.0670No
43HLA-DPB1ENSG00000223865.1124027-0.0650.0614No
44PRKCBENSG00000166501.1425710-0.1110.0252No
45TRAF6ENSG00000175104.1526280-0.1280.0167No
46MAPK14ENSG00000112062.1026416-0.1330.0191No
47TGFB1ENSG00000105329.1026855-0.1450.0145No
48HLA-DOBENSG00000241106.826961-0.1480.0183No
49NFKBIBENSG00000104825.1727749-0.1720.0064No
50ITGB2ENSG00000160255.1827949-0.1790.0091No
51JAK1ENSG00000162434.1328776-0.204-0.0024No
52HLA-DRB1ENSG00000196126.1128911-0.2090.0032No
53MAP3K7ENSG00000135341.1829362-0.2230.0017No
54STAT1ENSG00000115415.1830631-0.263-0.0180No
55HLA-DOAENSG00000204252.1432977-0.335-0.0609No
56HLA-DPA1ENSG00000231389.735055-0.368-0.0959No
57IL12AENSG00000168811.735073-0.368-0.0808No
58NCF1ENSG00000158517.1535600-0.393-0.0769No
59HLA-DMAENSG00000204257.1537225-0.465-0.0968No
60HLA-DMBENSG00000242574.937679-0.501-0.0867No
61ITGB1ENSG00000150093.1937687-0.501-0.0656No
62TAB2ENSG00000055208.1937980-0.526-0.0505No
63MAPK1ENSG00000100030.1438116-0.536-0.0311No
64NCF2ENSG00000116701.1439400-0.627-0.0358No
65JUNENSG00000177606.740305-0.779-0.0249No
66FCGR2CENSG00000244682.740962-1.0810.0048No
Table: GSEA details [plain text format]



Fig 2: KEGG_LEISHMANIA_INFECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_LEISHMANIA_INFECTION: Random ES distribution   
Gene set null distribution of ES for KEGG_LEISHMANIA_INFECTION