Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Normalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH |
| Phenotype | Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH |
| Upregulated in class | FSHD2 |
| GeneSet | NABA_BASEMENT_MEMBRANES |
| Enrichment Score (ES) | 0.46796024 |
| Normalized Enrichment Score (NES) | 1.7177522 |
| Nominal p-value | 0.0034129692 |
| FDR q-value | 0.14226411 |
| FWER p-Value | 0.984 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | LAMA1 | ENSG00000101680.15 | 292 | 1.136 | 0.0699 | Yes | ||
| 2 | NTN4 | ENSG00000074527.12 | 840 | 0.901 | 0.1177 | Yes | ||
| 3 | NTN5 | ENSG00000142233.11 | 1001 | 0.859 | 0.1720 | Yes | ||
| 4 | NTNG1 | ENSG00000162631.18 | 1784 | 0.736 | 0.2029 | Yes | ||
| 5 | LAMB4 | ENSG00000091128.13 | 2043 | 0.699 | 0.2440 | Yes | ||
| 6 | NTNG2 | ENSG00000196358.11 | 2685 | 0.635 | 0.2715 | Yes | ||
| 7 | COL6A6 | ENSG00000206384.10 | 2896 | 0.614 | 0.3080 | Yes | ||
| 8 | LAMB1 | ENSG00000091136.14 | 3394 | 0.576 | 0.3350 | Yes | ||
| 9 | LAMC3 | ENSG00000050555.18 | 4992 | 0.492 | 0.3295 | Yes | ||
| 10 | COL4A4 | ENSG00000081052.12 | 5076 | 0.485 | 0.3604 | Yes | ||
| 11 | LAMA3 | ENSG00000053747.16 | 5156 | 0.480 | 0.3910 | Yes | ||
| 12 | NID2 | ENSG00000087303.18 | 5592 | 0.454 | 0.4112 | Yes | ||
| 13 | LAMA5 | ENSG00000130702.15 | 5685 | 0.448 | 0.4394 | Yes | ||
| 14 | COLQ | ENSG00000206561.13 | 6095 | 0.428 | 0.4585 | Yes | ||
| 15 | NTN3 | ENSG00000162068.2 | 6808 | 0.396 | 0.4680 | Yes | ||
| 16 | COL6A3 | ENSG00000163359.15 | 12073 | 0.268 | 0.3581 | No | ||
| 17 | NID1 | ENSG00000116962.15 | 12648 | 0.250 | 0.3611 | No | ||
| 18 | USH2A | ENSG00000042781.13 | 12814 | 0.244 | 0.3736 | No | ||
| 19 | LAMA2 | ENSG00000196569.12 | 14748 | 0.182 | 0.3390 | No | ||
| 20 | COL6A2 | ENSG00000142173.15 | 14929 | 0.176 | 0.3465 | No | ||
| 21 | COL4A3 | ENSG00000169031.19 | 15183 | 0.168 | 0.3518 | No | ||
| 22 | NTN1 | ENSG00000065320.9 | 17067 | 0.116 | 0.3138 | No | ||
| 23 | COL4A6 | ENSG00000197565.15 | 17112 | 0.114 | 0.3205 | No | ||
| 24 | LAMB3 | ENSG00000196878.15 | 17382 | 0.108 | 0.3213 | No | ||
| 25 | AGRN | ENSG00000188157.15 | 18021 | 0.090 | 0.3118 | No | ||
| 26 | COL6A1 | ENSG00000142156.14 | 18165 | 0.087 | 0.3142 | No | ||
| 27 | PAPLN | ENSG00000100767.16 | 22695 | -0.031 | 0.2062 | No | ||
| 28 | COL18A1 | ENSG00000182871.16 | 22895 | -0.036 | 0.2038 | No | ||
| 29 | HSPG2 | ENSG00000142798.20 | 24057 | -0.066 | 0.1800 | No | ||
| 30 | COL4A5 | ENSG00000188153.13 | 24793 | -0.085 | 0.1679 | No | ||
| 31 | LAMA4 | ENSG00000112769.20 | 24827 | -0.086 | 0.1730 | No | ||
| 32 | COL4A2 | ENSG00000134871.19 | 26354 | -0.131 | 0.1447 | No | ||
| 33 | COL15A1 | ENSG00000204291.11 | 27409 | -0.161 | 0.1300 | No | ||
| 34 | LAMC1 | ENSG00000135862.6 | 28753 | -0.203 | 0.1112 | No | ||
| 35 | LAMC2 | ENSG00000058085.15 | 31167 | -0.284 | 0.0717 | No | ||
| 36 | COL6A5 | ENSG00000172752.14 | 32299 | -0.309 | 0.0652 | No | ||
| 37 | LAMB2 | ENSG00000172037.14 | 32705 | -0.324 | 0.0773 | No | ||
| 38 | COL4A1 | ENSG00000187498.16 | 36388 | -0.420 | 0.0163 | No | ||
| 39 | NPNT | ENSG00000168743.12 | 39626 | -0.650 | -0.0184 | No | ||
| 40 | HMCN1 | ENSG00000143341.12 | 40444 | -0.822 | 0.0174 | No |
