Details for gene set NABA_ECM_GLYCOPROTEINS[GSEA]

Table: GSEA Results Summary

Dataset	Normalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Phenotype	Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in class	FSHD2
GeneSet	NABA_ECM_GLYCOPROTEINS
Enrichment Score (ES)	0.34757543
Normalized Enrichment Score (NES)	1.6885211
Nominal p-value	0.0
FDR q-value	0.16407658
FWER p-Value	0.994

Fig 1: Enrichment plot: NABA_ECM_GLYCOPROTEINS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NELL2	ENSG00000184613.10			198	1.241	0.0112	Yes
2	LAMA1	ENSG00000101680.15			292	1.136	0.0236	Yes
3	TECTA	ENSG00000109927.10			293	1.135	0.0383	Yes
4	BGLAP	ENSG00000242252.2			299	1.133	0.0528	Yes
5	VWCE	ENSG00000167992.13			337	1.099	0.0661	Yes
6	VWA5A	ENSG00000110002.16			433	1.042	0.0773	Yes
7	MFAP4	ENSG00000166482.11			456	1.033	0.0901	Yes
8	GLDN	ENSG00000186417.14			573	0.990	0.1001	Yes
9	EFEMP1	ENSG00000115380.20			575	0.988	0.1128	Yes
10	RSPO1	ENSG00000169218.14			606	0.975	0.1247	Yes
11	SLIT1	ENSG00000187122.17			635	0.962	0.1365	Yes
12	FBLN1	ENSG00000077942.19			705	0.938	0.1469	Yes
13	NTN4	ENSG00000074527.12			840	0.901	0.1553	Yes
14	MGP	ENSG00000111341.10			913	0.879	0.1649	Yes
15	TNN	ENSG00000120332.16			965	0.867	0.1749	Yes
16	NTN5	ENSG00000142233.11			1001	0.859	0.1851	Yes
17	TSPEAR	ENSG00000175894.18			1291	0.804	0.1885	Yes
18	RELN	ENSG00000189056.14			1303	0.802	0.1986	Yes
19	PCOLCE2	ENSG00000163710.9			1312	0.800	0.2087	Yes
20	TINAG	ENSG00000137251.16			1358	0.793	0.2179	Yes
21	VWA5B2	ENSG00000145198.14			1649	0.754	0.2205	Yes
22	EDIL3	ENSG00000164176.13			1748	0.740	0.2277	Yes
23	NTNG1	ENSG00000162631.18			1784	0.736	0.2364	Yes
24	LTBP4	ENSG00000090006.17			1825	0.729	0.2448	Yes
25	EMID1	ENSG00000186998.16			1845	0.725	0.2537	Yes
26	SNED1	ENSG00000162804.14			1875	0.721	0.2624	Yes
27	LAMB4	ENSG00000091128.13			2043	0.699	0.2673	Yes
28	LTBP1	ENSG00000049323.16			2175	0.686	0.2730	Yes
29	IGFBP3	ENSG00000146674.15			2420	0.661	0.2756	Yes
30	SMOC2	ENSG00000112562.18			2598	0.644	0.2796	Yes
31	NTNG2	ENSG00000196358.11			2685	0.635	0.2857	Yes
32	CRISPLD1	ENSG00000121005.9			2756	0.628	0.2921	Yes
33	RSPO3	ENSG00000146374.14			3267	0.586	0.2872	Yes
34	SBSPON	ENSG00000164764.11			3341	0.581	0.2930	Yes
35	LAMB1	ENSG00000091136.14			3394	0.576	0.2992	Yes
36	SPON1	ENSG00000262655.4			3535	0.565	0.3030	Yes
37	IGFBP4	ENSG00000141753.7			3723	0.556	0.3057	Yes
38	MMRN2	ENSG00000173269.14			3779	0.551	0.3115	Yes
39	CRELD1	ENSG00000163703.17			4296	0.524	0.3056	Yes
40	LGI3	ENSG00000168481.9			4431	0.519	0.3091	Yes
41	SSPO	ENSG00000197558.12			4521	0.518	0.3136	Yes
42	LAMC3	ENSG00000050555.18			4992	0.492	0.3085	Yes
43	LAMA3	ENSG00000053747.16			5156	0.480	0.3107	Yes
44	CCN5	ENSG00000064205.10			5220	0.476	0.3153	Yes
45	VWF	ENSG00000110799.13			5222	0.476	0.3215	Yes
46	ANOS1	ENSG00000011201.12			5269	0.473	0.3265	Yes
47	NID2	ENSG00000087303.18			5592	0.454	0.3245	Yes
48	LAMA5	ENSG00000130702.15			5685	0.448	0.3280	Yes
49	EYS	ENSG00000188107.15			5877	0.440	0.3291	Yes
50	PCOLCE	ENSG00000106333.13			5878	0.440	0.3347	Yes
51	COLQ	ENSG00000206561.13			6095	0.428	0.3350	Yes
52	SPARCL1	ENSG00000152583.12			6166	0.425	0.3388	Yes
53	COCH	ENSG00000100473.18			6222	0.421	0.3429	Yes
54	LTBP3	ENSG00000168056.16			6522	0.407	0.3409	Yes
55	LGI4	ENSG00000153902.14			6529	0.407	0.3460	Yes
56	NTN3	ENSG00000162068.2			6808	0.396	0.3443	Yes
57	CCN3	ENSG00000136999.5			6958	0.391	0.3458	Yes
58	RSPO2	ENSG00000147655.12			7153	0.382	0.3460	Yes
59	FGG	ENSG00000171557.17			7287	0.376	0.3476	Yes
60	VWA7	ENSG00000204396.11			7599	0.367	0.3447	No
61	ADIPOQ	ENSG00000181092.10			7776	0.363	0.3451	No
62	ZP2	ENSG00000103310.10			8318	0.352	0.3365	No
63	MEPE	ENSG00000152595.16			8577	0.348	0.3347	No
64	VWA2	ENSG00000165816.13			8831	0.342	0.3329	No
65	FNDC1	ENSG00000164694.17			10822	0.298	0.2882	No
66	PXDNL	ENSG00000147485.13			11090	0.288	0.2854	No
67	DSPP	ENSG00000152591.15			11156	0.285	0.2875	No
68	TNR	ENSG00000116147.17			11282	0.285	0.2882	No
69	CTHRC1	ENSG00000164932.13			11661	0.284	0.2826	No
70	VWA3A	ENSG00000175267.15			12007	0.271	0.2777	No
71	NID1	ENSG00000116962.15			12648	0.250	0.2653	No
72	USH2A	ENSG00000042781.13			12814	0.244	0.2644	No
73	CCN6	ENSG00000112761.20			13264	0.230	0.2564	No
74	VTN	ENSG00000109072.14			13279	0.229	0.2591	No
75	IGFBPL1	ENSG00000137142.5			13388	0.226	0.2593	No
76	IGFBP2	ENSG00000115457.10			13426	0.224	0.2613	No
77	MATN4	ENSG00000124159.15			13437	0.223	0.2640	No
78	MATN1	ENSG00000162510.6			13868	0.210	0.2562	No
79	TNFAIP6	ENSG00000123610.5			14070	0.204	0.2539	No
80	LAMA2	ENSG00000196569.12			14748	0.182	0.2398	No
81	IGFALS	ENSG00000099769.5			15231	0.167	0.2302	No
82	VWA3B	ENSG00000168658.19			15379	0.162	0.2287	No
83	SPON2	ENSG00000159674.12			15536	0.158	0.2269	No
84	HMCN2	ENSG00000148357.16			15639	0.155	0.2264	No
85	MFGE8	ENSG00000140545.15			15705	0.153	0.2268	No
86	EMILIN3	ENSG00000183798.5			15977	0.146	0.2221	No
87	IGSF10	ENSG00000152580.8			16016	0.145	0.2230	No
88	EMILIN1	ENSG00000138080.14			16451	0.132	0.2142	No
89	LGI1	ENSG00000108231.13			16455	0.132	0.2158	No
90	SMOC1	ENSG00000198732.10			16826	0.122	0.2083	No
91	NTN1	ENSG00000065320.9			17067	0.116	0.2040	No
92	SVEP1	ENSG00000165124.18			17205	0.112	0.2021	No
93	LAMB3	ENSG00000196878.15			17382	0.108	0.1992	No
94	AGRN	ENSG00000188157.15			18021	0.090	0.1848	No
95	FBN1	ENSG00000166147.13			18163	0.087	0.1825	No
96	SLIT3	ENSG00000184347.14			18947	0.067	0.1642	No
97	KCP	ENSG00000135253.13			18949	0.066	0.1650	No
98	ZP1	ENSG00000149506.11			19012	0.065	0.1644	No
99	CRELD2	ENSG00000184164.14			19149	0.061	0.1618	No
100	CILP2	ENSG00000160161.9			19234	0.059	0.1605	No
101	THBS2	ENSG00000186340.15			19463	0.052	0.1557	No
102	MFAP2	ENSG00000117122.14			19781	0.044	0.1485	No
103	VIT	ENSG00000205221.12			20556	0.023	0.1299	No
104	NELL1	ENSG00000165973.19			20760	0.019	0.1252	No
105	FGA	ENSG00000171560.16			20943	0.014	0.1209	No
106	AMELX	ENSG00000125363.14			21206	0.007	0.1146	No
107	FBLN2	ENSG00000163520.14			21217	0.006	0.1144	No
108	CRISPLD2	ENSG00000103196.12			21721	-0.007	0.1023	No
109	THBS1	ENSG00000137801.11			22033	-0.015	0.0949	No
110	INTS14	ENSG00000138614.15			22139	-0.016	0.0925	No
111	CCN2	ENSG00000118523.6			22253	-0.019	0.0900	No
112	TSKU	ENSG00000182704.8			22329	-0.022	0.0885	No
113	FNDC8	ENSG00000073598.6			22463	-0.026	0.0855	No
114	PXDN	ENSG00000130508.11			22625	-0.029	0.0820	No
115	PAPLN	ENSG00000100767.16			22695	-0.031	0.0807	No
116	EMILIN2	ENSG00000132205.11			23319	-0.047	0.0661	No
117	VWA1	ENSG00000179403.12			24198	-0.070	0.0456	No
118	OIT3	ENSG00000138315.13			24592	-0.080	0.0370	No
119	LAMA4	ENSG00000112769.20			24827	-0.086	0.0324	No
120	EFEMP2	ENSG00000172638.13			24938	-0.090	0.0309	No
121	DMP1	ENSG00000152592.14			26068	-0.123	0.0049	No
122	FBN2	ENSG00000138829.12			26300	-0.129	0.0010	No
123	FNDC7	ENSG00000143107.10			26336	-0.130	0.0018	No
124	IGFBP5	ENSG00000115461.5			27066	-0.151	-0.0140	No
125	TNXB	ENSG00000168477.19			27304	-0.158	-0.0178	No
126	THBS3	ENSG00000169231.13			27375	-0.160	-0.0174	No
127	MATN2	ENSG00000132561.14			27429	-0.162	-0.0166	No
128	SPARC	ENSG00000113140.11			28014	-0.181	-0.0285	No
129	MFAP3	ENSG00000037749.12			28424	-0.194	-0.0360	No
130	ECM2	ENSG00000106823.12			28489	-0.196	-0.0350	No
131	ZP3	ENSG00000188372.15			28519	-0.197	-0.0332	No
132	IGFBP1	ENSG00000146678.10			28557	-0.198	-0.0315	No
133	LTBP2	ENSG00000119681.12			28615	-0.200	-0.0303	No
134	LAMC1	ENSG00000135862.6			28753	-0.203	-0.0311	No
135	MFAP1	ENSG00000140259.7			29124	-0.216	-0.0373	No
136	POMZP3	ENSG00000146707.14			29178	-0.217	-0.0358	No
137	CCN1	ENSG00000142871.17			30290	-0.253	-0.0596	No
138	MXRA5	ENSG00000101825.8			30601	-0.263	-0.0638	No
139	INTS6L	ENSG00000165359.15			30623	-0.263	-0.0609	No
140	RSPO4	ENSG00000101282.9			30644	-0.264	-0.0580	No
141	EGFLAM	ENSG00000164318.18			30681	-0.265	-0.0554	No
142	COMP	ENSG00000105664.11			31006	-0.277	-0.0598	No
143	FBN3	ENSG00000142449.13			31009	-0.277	-0.0562	No
144	SRPX	ENSG00000101955.15			31035	-0.278	-0.0532	No
145	FBLN5	ENSG00000140092.14			31116	-0.281	-0.0515	No
146	LAMC2	ENSG00000058085.15			31167	-0.284	-0.0491	No
147	THSD4	ENSG00000187720.14			31761	-0.288	-0.0599	No
148	LGI2	ENSG00000153012.12			32016	-0.297	-0.0622	No
149	MFAP5	ENSG00000197614.11			32055	-0.298	-0.0593	No
150	DMBT1	ENSG00000187908.19			32453	-0.315	-0.0649	No
151	FGL2	ENSG00000127951.7			32655	-0.323	-0.0656	No
152	LAMB2	ENSG00000172037.14			32705	-0.324	-0.0626	No
153	VWA5B1	ENSG00000158816.15			32729	-0.325	-0.0590	No
154	FGB	ENSG00000171564.11			33043	-0.336	-0.0623	No
155	ABI3BP	ENSG00000154175.17			33553	-0.338	-0.0703	No
156	THBS4	ENSG00000113296.14			34200	-0.350	-0.0816	No
157	ELN	ENSG00000049540.17			35316	-0.380	-0.1039	No
158	TINAGL1	ENSG00000142910.16			36281	-0.415	-0.1220	No
159	CCN4	ENSG00000104415.14			36365	-0.419	-0.1186	No
160	IGFBP7	ENSG00000163453.11			36410	-0.421	-0.1143	No
161	TNC	ENSG00000041982.16			36501	-0.427	-0.1109	No
162	AEBP1	ENSG00000106624.11			36626	-0.432	-0.1084	No
163	FBLN7	ENSG00000144152.13			36684	-0.435	-0.1041	No
164	POSTN	ENSG00000133110.15			36812	-0.441	-0.1015	No
165	CILP	ENSG00000138615.6			36960	-0.449	-0.0993	No
166	SRPX2	ENSG00000102359.7			37299	-0.471	-0.1015	No
167	CRIM1	ENSG00000150938.10			37543	-0.488	-0.1011	No
168	TGFBI	ENSG00000120708.17			37818	-0.514	-0.1011	No
169	ZPLD1	ENSG00000170044.8			37968	-0.525	-0.0980	No
170	SLIT2	ENSG00000145147.20			38005	-0.528	-0.0920	No
171	OTOG	ENSG00000188162.11			38476	-0.558	-0.0963	No
172	TECTB	ENSG00000119913.6			38653	-0.566	-0.0933	No
173	SPP1	ENSG00000118785.14			38686	-0.569	-0.0867	No
174	FRAS1	ENSG00000138759.19			38912	-0.591	-0.0845	No
175	IGFBP6	ENSG00000167779.9			39424	-0.628	-0.0889	No
176	IBSP	ENSG00000029559.7			39472	-0.633	-0.0818	No
177	NPNT	ENSG00000168743.12			39626	-0.650	-0.0772	No
178	NDNF	ENSG00000173376.14			39706	-0.662	-0.0705	No
179	ECM1	ENSG00000143369.15			39921	-0.699	-0.0667	No
180	GAS6	ENSG00000183087.15			39997	-0.713	-0.0593	No
181	DPT	ENSG00000143196.5			40183	-0.749	-0.0542	No
182	HMCN1	ENSG00000143341.12			40444	-0.822	-0.0499	No
183	FN1	ENSG00000115414.19			40842	-0.991	-0.0468	No
184	MATN3	ENSG00000132031.13			41030	-1.191	-0.0359	No
185	BMPER	ENSG00000164619.10			41089	-1.386	-0.0194	No
186	VWDE	ENSG00000146530.14			41124	-1.636	0.0009	No

Fig 2: NABA_ECM_GLYCOPROTEINS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: NABA_ECM_GLYCOPROTEINS: Random ES distribution   
Gene set null distribution of ES for NABA_ECM_GLYCOPROTEINS