DatasetNormalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
PhenotypePhenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in classARH
GeneSetREACTOME_CELL_CYCLE_CHECKPOINTS
Enrichment Score (ES)-0.5207678
Normalized Enrichment Score (NES)-2.9338794
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_CELL_CYCLE_CHECKPOINTS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HIST1H4DENSG00000277157.126030.643-0.0565No
2ZNF385AENSG00000161642.1728500.618-0.0557No
3CDKN1BENSG00000111276.1143800.521-0.0873No
4MDM4ENSG00000198625.1344300.519-0.0827No
5HIST1H2BKENSG00000197903.753940.465-0.1011No
6ANAPC2ENSG00000176248.961530.426-0.1150No
7HIST1H4EENSG00000276966.262440.421-0.1125No
8ANAPC5ENSG00000089053.1363680.414-0.1109No
9DYNC1I1ENSG00000158560.1470760.386-0.1239No
10HIST4H4ENSG00000197837.382200.353-0.1480No
11RCC2ENSG00000179051.1491120.331-0.1661No
12HIST1H2BMENSG00000273703.1103850.305-0.1938No
13CENPPENSG00000188312.14108940.295-0.2030No
14RAD9AENSG00000172613.8120320.270-0.2278No
15HIST1H2BHENSG00000275713.2125020.254-0.2364No
16ITGB3BPENSG00000142856.16137410.215-0.2643No
17HIST3H2BBENSG00000196890.4137490.214-0.2621No
18HIST3H3ENSG00000168148.3137610.214-0.2600No
19PSMB8ENSG00000204264.11140580.204-0.2650No
20B9D2ENSG00000123810.8141210.202-0.2643No
21CHEK2ENSG00000183765.22145220.190-0.2720No
22HIST1H4HENSG00000158406.4147850.181-0.2764No
23KAT5ENSG00000172977.13156170.156-0.2950No
24RPS27ENSG00000177954.14156220.156-0.2933No
25PIAS4ENSG00000105229.7156570.155-0.2924No
26RANGAP1ENSG00000100401.19157330.152-0.2926No
27CENPCENSG00000145241.11158810.148-0.2945No
28CDC26ENSG00000176386.9158900.148-0.2931No
29HIST1H2BDENSG00000158373.8159030.147-0.2918No
30HIST1H2BJENSG00000124635.8168240.122-0.3129No
31RFC5ENSG00000111445.14168830.120-0.3130No
32PPP2R5AENSG00000066027.12169370.118-0.3130No
33RPA2ENSG00000117748.10169450.118-0.3118No
34RAD1ENSG00000113456.19170500.116-0.3131No
35HERC2ENSG00000128731.17171930.112-0.3153No
36MCM7ENSG00000166508.17174950.104-0.3215No
37HIST1H4IENSG00000276180.1176200.100-0.3234No
38CCNA1ENSG00000133101.10177340.098-0.3251No
39HIST1H2BGENSG00000273802.2177960.096-0.3255No
40PMF1ENSG00000160783.19179110.093-0.3273No
41TOP3AENSG00000177302.15181160.088-0.3313No
42MDC1ENSG00000137337.15182060.085-0.3325No
43ABRAXAS1ENSG00000163322.14187100.073-0.3440No
44NUP160ENSG00000030066.13188450.069-0.3465No
45PSME2ENSG00000100911.16192740.057-0.3564No
46PSMA3ENSG00000100567.13194010.054-0.3589No
47PSMA2ENSG00000106588.11195620.050-0.3622No
48ORC2ENSG00000115942.9196070.048-0.3628No
49MRE11ENSG00000020922.12198960.041-0.3694No
50PSMB10ENSG00000205220.12199370.040-0.3699No
51NUP43ENSG00000120253.14200470.038-0.3721No
52HIST1H2BEENSG00000274290.2200740.038-0.3724No
53CENPTENSG00000102901.13200960.037-0.3725No
54HIST1H2BLENSG00000185130.5202060.034-0.3748No
55HIST1H4JENSG00000197238.4204580.026-0.3806No
56PSMC4ENSG00000013275.8208100.018-0.3890No
57HIST1H2BFENSG00000277224.2209280.014-0.3917No
58UBCENSG00000150991.15209480.013-0.3920No
59PSMA6ENSG00000100902.11209760.013-0.3925No
60PSMB4ENSG00000159377.11211270.007-0.3961No
61HIST1H2BOENSG00000274641.1211900.007-0.3976No
62CDKN1AENSG00000124762.13212970.004-0.4001No
63SFNENSG00000175793.12213060.004-0.4003No
64NBNENSG00000104320.1321733-0.007-0.4106No
65UBBENSG00000170315.1422145-0.016-0.4205No
66RAD50ENSG00000113522.1422224-0.019-0.4222No
67UBA52ENSG00000221983.822256-0.020-0.4227No
68SEC13ENSG00000157020.1822468-0.026-0.4276No
69HIST2H2BEENSG00000184678.1022644-0.030-0.4316No
70TOPBP1ENSG00000163781.1422850-0.035-0.4362No
71NDEL1ENSG00000166579.1522882-0.036-0.4365No
72PSMD3ENSG00000108344.1523004-0.040-0.4391No
73PSME1ENSG00000092010.1523061-0.041-0.4400No
74HIST1H4LENSG00000275126.123088-0.042-0.4401No
75DYNLL2ENSG00000264364.323336-0.048-0.4457No
76PSMA1ENSG00000129084.1723337-0.048-0.4451No
77PSMB9ENSG00000240065.823347-0.048-0.4448No
78HIST1H2BBENSG00000276410.323366-0.049-0.4447No
79ORC5ENSG00000164815.1123413-0.050-0.4453No
80BABAM1ENSG00000105393.1623442-0.051-0.4454No
81NUDCENSG00000090273.1423568-0.054-0.4479No
82SEH1LENSG00000085415.1623768-0.059-0.4521No
83BABAM2ENSG00000158019.2023893-0.063-0.4544No
84NDE1ENSG00000072864.1523985-0.064-0.4559No
85RNF8ENSG00000112130.1724033-0.065-0.4563No
86ANAPC1ENSG00000153107.1324092-0.067-0.4570No
87WRNENSG00000165392.1024224-0.071-0.4594No
88SEM1ENSG00000127922.924231-0.071-0.4588No
89ATMENSG00000149311.1824258-0.072-0.4586No
90MDM2ENSG00000135679.2524559-0.079-0.4651No
91PSMB7ENSG00000136930.1324754-0.084-0.4689No
92RPS27AENSG00000143947.1324801-0.086-0.4691No
93NUP133ENSG00000069248.1224802-0.086-0.4681No
94PPP2R5DENSG00000112640.1524932-0.090-0.4703No
95MIS12ENSG00000167842.1525231-0.097-0.4765No
96NSL1ENSG00000117697.1525239-0.097-0.4756No
97DYNC1LI2ENSG00000135720.1325352-0.101-0.4772No
98PSMB1ENSG00000008018.925518-0.106-0.4801No
99HIST1H2BNENSG00000233822.425715-0.111-0.4837No
100PSMB6ENSG00000142507.1025718-0.112-0.4825No
101DNA2ENSG00000138346.1525812-0.114-0.4835No
102PSMD8ENSG00000099341.1125815-0.114-0.4823No
103HIST1H2BCENSG00000180596.725836-0.115-0.4815No
104DBF4ENSG00000006634.825980-0.120-0.4836No
105TP53BP1ENSG00000067369.1326057-0.123-0.4841No
106ANAPC10ENSG00000164162.1426104-0.124-0.4839No
107ATRIPENSG00000164053.2126108-0.124-0.4826No
108PSMB2ENSG00000126067.1226219-0.126-0.4839No
109ANAPC7ENSG00000196510.1226263-0.128-0.4835No
110HIST1H4KENSG00000273542.126308-0.129-0.4832No
111PSMD2ENSG00000175166.1726310-0.129-0.4818No
112PSMD9ENSG00000110801.1426323-0.129-0.4806No
113PCBP4ENSG00000090097.2126440-0.133-0.4820No
114PSMA7ENSG00000101182.1526454-0.134-0.4808No
115PSMC1ENSG00000100764.1426467-0.134-0.4796No
116ANAPC11ENSG00000141552.1726543-0.136-0.4799No
117H2AFXENSG00000188486.326590-0.138-0.4795No
118RFC2ENSG00000049541.1126606-0.138-0.4784No
119PSMF1ENSG00000125818.1826669-0.140-0.4783No
120ANAPC4ENSG00000053900.1026737-0.142-0.4784No
121PSMD4ENSG00000159352.1526816-0.144-0.4787No
122NUP107ENSG00000111581.1026867-0.145-0.4783No
123PPP2R5EENSG00000154001.1427182-0.155-0.4843No
124TP53ENSG00000141510.1727245-0.156-0.4840No
125PSMD13ENSG00000185627.1827620-0.168-0.4913No
126PSMD11ENSG00000108671.1127717-0.171-0.4918No
127PSMC5ENSG00000087191.1327761-0.172-0.4909No
128NUP85ENSG00000125450.1127774-0.173-0.4893No
129PSMB3ENSG00000277791.527956-0.179-0.4917No
130CLASP1ENSG00000074054.1828043-0.182-0.4918No
131ORC4ENSG00000115947.1328129-0.185-0.4919No
132NUP98ENSG00000110713.1728185-0.186-0.4911No
133CLASP2ENSG00000163539.1728270-0.189-0.4911No
134COP1ENSG00000143207.2128300-0.189-0.4897No
135PSMD6ENSG00000163636.1028425-0.194-0.4906No
136PSMC6ENSG00000100519.1228449-0.195-0.4890No
137PPP1CCENSG00000186298.1228475-0.195-0.4874No
138PSMC3ENSG00000165916.828625-0.200-0.4888No
139ANAPC16ENSG00000166295.929001-0.212-0.4957No
140MCM3ENSG00000112118.2029007-0.212-0.4934No
141RHNO1ENSG00000171792.1129110-0.215-0.4935No
142CDC27ENSG00000004897.1229738-0.236-0.5063No
143PSMD7ENSG00000103035.1130001-0.244-0.5100No
144PSMA4ENSG00000041357.1630107-0.247-0.5098No
145CDC23ENSG00000094880.1130249-0.252-0.5104No
146RFC4ENSG00000163918.1030672-0.265-0.5178Yes
147PPP2R5CENSG00000078304.1930677-0.265-0.5150Yes
148UBE2D1ENSG00000072401.1530679-0.265-0.5121Yes
149YWHAQENSG00000134308.1430852-0.271-0.5133Yes
150ZW10ENSG00000086827.930856-0.271-0.5103Yes
151PPP2R1BENSG00000137713.1630954-0.276-0.5096Yes
152MCM8ENSG00000125885.1331052-0.279-0.5089Yes
153PPP2R5BENSG00000068971.1431101-0.281-0.5070Yes
154RPA1ENSG00000132383.1231119-0.282-0.5043Yes
155HIST1H4FENSG00000274618.131237-0.285-0.5040Yes
156PSMA8ENSG00000154611.1431324-0.285-0.5029Yes
157DYNC1H1ENSG00000197102.1231822-0.290-0.5118Yes
158BUB3ENSG00000154473.1832087-0.300-0.5150Yes
159INCENPENSG00000149503.1332126-0.301-0.5125Yes
160CENPQENSG00000031691.732142-0.302-0.5095Yes
161BRCC3ENSG00000185515.1432158-0.302-0.5066Yes
162CCNE1ENSG00000105173.1432197-0.305-0.5041Yes
163CDK2ENSG00000123374.1132246-0.307-0.5019Yes
164YWHAGENSG00000170027.732308-0.310-0.4999Yes
165CENPOENSG00000138092.1132352-0.312-0.4975Yes
166CENPUENSG00000151725.1232395-0.313-0.4951Yes
167PPP2CAENSG00000113575.1032408-0.314-0.4919Yes
168NUF2ENSG00000143228.1332503-0.317-0.4907Yes
169MCM2ENSG00000073111.1432546-0.318-0.4882Yes
170RANBP2ENSG00000153201.1632550-0.318-0.4847Yes
171RAD17ENSG00000152942.1932645-0.322-0.4834Yes
172RNF168ENSG00000163961.432669-0.323-0.4804Yes
173PSMD10ENSG00000101843.1932694-0.324-0.4774Yes
174PSMD12ENSG00000197170.1032756-0.326-0.4753Yes
175UIMC1ENSG00000087206.1732823-0.329-0.4732Yes
176AHCTF1ENSG00000153207.1532851-0.330-0.4702Yes
177RBBP8ENSG00000101773.1932876-0.331-0.4671Yes
178RMI2ENSG00000175643.1033556-0.338-0.4800Yes
179DSN1ENSG00000149636.1534130-0.346-0.4902Yes
180CDC20ENSG00000117399.1434187-0.349-0.4877Yes
181HUS1ENSG00000136273.1334665-0.355-0.4954Yes
182PPP2R1AENSG00000105568.1834725-0.357-0.4929Yes
183MCM6ENSG00000076003.534728-0.357-0.4890Yes
184TAOK1ENSG00000160551.1134732-0.358-0.4851Yes
185SGO1ENSG00000129810.1534782-0.360-0.4823Yes
186PSMB5ENSG00000100804.1935039-0.367-0.4845Yes
187UBE2V2ENSG00000169139.1235086-0.368-0.4815Yes
188CDKN2AENSG00000147889.1735138-0.371-0.4786Yes
189CENPHENSG00000153044.1035190-0.373-0.4757Yes
190PSMD5ENSG00000095261.1435294-0.378-0.4740Yes
191SUMO1ENSG00000116030.1635376-0.382-0.4718Yes
192PSME3ENSG00000131467.1135430-0.385-0.4688Yes
193YWHABENSG00000166913.1335457-0.386-0.4652Yes
194CENPSENSG00000175279.2235550-0.391-0.4631Yes
195NUP37ENSG00000075188.935611-0.394-0.4602Yes
196PSMA5ENSG00000143106.1335640-0.395-0.4565Yes
197YWHAZENSG00000164924.1835696-0.397-0.4534Yes
198HIST1H2BIENSG00000278588.135748-0.400-0.4502Yes
199CDC16ENSG00000130177.1635800-0.402-0.4470Yes
200BLMENSG00000197299.1235803-0.402-0.4426Yes
201MCM5ENSG00000100297.1635805-0.402-0.4381Yes
202PSMC2ENSG00000161057.1235948-0.403-0.4371Yes
203CDC25CENSG00000158402.2035954-0.403-0.4328Yes
204PAFAH1B1ENSG00000007168.1336076-0.408-0.4312Yes
205HIST1H4CENSG00000197061.436084-0.408-0.4268Yes
206CENPKENSG00000123219.1336086-0.408-0.4223Yes
207UBE2NENSG00000177889.1036090-0.408-0.4179Yes
208DYNC1I2ENSG00000077380.1536153-0.411-0.4148Yes
209BIRC5ENSG00000089685.1536279-0.415-0.4133Yes
210ORC3ENSG00000135336.1436389-0.421-0.4113Yes
211PSMD14ENSG00000115233.1236419-0.422-0.4073Yes
212YWHAEENSG00000108953.1736492-0.426-0.4043Yes
213CCNB2ENSG00000157456.836613-0.432-0.4025Yes
214RPA3ENSG00000106399.1136661-0.434-0.3988Yes
215SPC24ENSG00000161888.1136669-0.434-0.3941Yes
216PLK1ENSG00000166851.1536707-0.436-0.3902Yes
217ATRENSG00000175054.1636761-0.438-0.3866Yes
218KIF2CENSG00000142945.1336852-0.443-0.3839Yes
219PHF20ENSG00000025293.1736854-0.443-0.3790Yes
220ANAPC15ENSG00000110200.836886-0.445-0.3748Yes
221CENPNENSG00000166451.1336906-0.447-0.3703Yes
222KIF2AENSG00000068796.1636994-0.452-0.3675Yes
223HIST2H4AENSG00000270882.237017-0.453-0.3630Yes
224SPC25ENSG00000152253.937054-0.455-0.3588Yes
225MAPRE1ENSG00000101367.937101-0.458-0.3548Yes
226ORC1ENSG00000085840.1337179-0.462-0.3516Yes
227XPO1ENSG00000082898.1737227-0.465-0.3476Yes
228MAD1L1ENSG00000002822.1537265-0.468-0.3433Yes
229CCNE2ENSG00000175305.1737360-0.475-0.3403Yes
230SPDL1ENSG00000040275.1737361-0.475-0.3350Yes
231UBE2E1ENSG00000170142.1237384-0.477-0.3303Yes
232PKMYT1ENSG00000127564.1737418-0.479-0.3258Yes
233AURKBENSG00000178999.1337485-0.484-0.3220Yes
234SKA1ENSG00000154839.1037525-0.487-0.3176Yes
235RFC3ENSG00000133119.1337532-0.487-0.3123Yes
236PSMD1ENSG00000173692.1337725-0.504-0.3114Yes
237BUB1ENSG00000169679.1537763-0.508-0.3066Yes
238CKAP5ENSG00000175216.1537814-0.514-0.3022Yes
239MAD2L1ENSG00000164109.1437893-0.520-0.2983Yes
240NDC80ENSG00000080986.1337927-0.522-0.2933Yes
241BRIP1ENSG00000136492.837949-0.524-0.2880Yes
242CENPAENSG00000115163.1537993-0.527-0.2832Yes
243CDC7ENSG00000097046.1338052-0.531-0.2787Yes
244PSME4ENSG00000068878.1538072-0.532-0.2733Yes
245UBE2CENSG00000175063.1738091-0.534-0.2678Yes
246BUB1BENSG00000156970.1238129-0.537-0.2627Yes
247CCNB1ENSG00000134057.1538169-0.540-0.2577Yes
248NSD2ENSG00000109685.1838242-0.546-0.2534Yes
249DYNC1LI1ENSG00000144635.938271-0.548-0.2480Yes
250CHEK1ENSG00000149554.1338279-0.549-0.2421Yes
251CENPLENSG00000120334.1538315-0.553-0.2368Yes
252DYNLL1ENSG00000088986.1138317-0.554-0.2307Yes
253GTSE1ENSG00000075218.1938414-0.557-0.2268Yes
254CDCA8ENSG00000134690.1138629-0.564-0.2258Yes
255PPP2CBENSG00000104695.1338708-0.572-0.2214Yes
256CENPMENSG00000100162.1538711-0.572-0.2151Yes
257SKA2ENSG00000182628.1338739-0.574-0.2093Yes
258CDC45ENSG00000093009.1038822-0.583-0.2049Yes
259ORC6ENSG00000091651.938888-0.589-0.1999Yes
260SGO2ENSG00000163535.1838980-0.599-0.1955Yes
261RAD9BENSG00000151164.1839057-0.607-0.1906Yes
262EXO1ENSG00000174371.1739163-0.615-0.1864Yes
263ZWINTENSG00000122952.1739173-0.616-0.1797Yes
264CLIP1ENSG00000130779.2039284-0.622-0.1755Yes
265CENPFENSG00000117724.1339444-0.631-0.1724Yes
266CDK1ENSG00000170312.1639453-0.632-0.1656Yes
267CLSPNENSG00000092853.1439505-0.635-0.1598Yes
268BARD1ENSG00000138376.1139685-0.660-0.1568Yes
269BRCA1ENSG00000012048.2239857-0.687-0.1534Yes
270KNTC1ENSG00000184445.1239875-0.690-0.1462Yes
271ERCC6LENSG00000186871.739947-0.704-0.1401Yes
272WEE1ENSG00000166483.1140002-0.714-0.1335Yes
273CDC6ENSG00000094804.1240060-0.723-0.1268Yes
274ZWILCHENSG00000174442.1240134-0.739-0.1204Yes
275KNL1ENSG00000137812.1940136-0.739-0.1122Yes
276CENPEENSG00000138778.1240145-0.740-0.1042Yes
277CDC25AENSG00000164045.1240263-0.768-0.0985Yes
278YWHAHENSG00000128245.1540295-0.774-0.0907Yes
279MCM4ENSG00000104738.1840591-0.872-0.0882Yes
280CCNA2ENSG00000145386.1040598-0.874-0.0787Yes
281RMI1ENSG00000178966.1640663-0.903-0.0702Yes
282MCM10ENSG00000065328.1640670-0.907-0.0603Yes
283HIST1H4BENSG00000278705.140718-0.927-0.0512Yes
284PSMB11ENSG00000222028.540874-1.018-0.0436Yes
285KIF18AENSG00000121621.740921-1.038-0.0332Yes
286CENPIENSG00000102384.1341099-1.425-0.0218Yes
287HIST1H4AENSG00000278637.141148-2.0930.0003Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_CELL_CYCLE_CHECKPOINTS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_CELL_CYCLE_CHECKPOINTS: Random ES distribution   
Gene set null distribution of ES for REACTOME_CELL_CYCLE_CHECKPOINTS