DatasetNormalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
PhenotypePhenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in classARH
GeneSetREACTOME_G2_M_CHECKPOINTS
Enrichment Score (ES)-0.49725354
Normalized Enrichment Score (NES)-2.5681546
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_G2_M_CHECKPOINTS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HIST1H4DENSG00000277157.126030.643-0.0498No
2HIST1H2BKENSG00000197903.753940.465-0.1079No
3HIST1H4EENSG00000276966.262440.421-0.1197No
4HIST4H4ENSG00000197837.382200.353-0.1603No
5HIST1H2BMENSG00000273703.1103850.305-0.2066No
6RAD9AENSG00000172613.8120320.270-0.2410No
7HIST1H2BHENSG00000275713.2125020.254-0.2470No
8HIST3H2BBENSG00000196890.4137490.214-0.2729No
9HIST3H3ENSG00000168148.3137610.214-0.2686No
10PSMB8ENSG00000204264.11140580.204-0.2714No
11CHEK2ENSG00000183765.22145220.190-0.2787No
12HIST1H4HENSG00000158406.4147850.181-0.2812No
13KAT5ENSG00000172977.13156170.156-0.2982No
14PIAS4ENSG00000105229.7156570.155-0.2958No
15HIST1H2BDENSG00000158373.8159030.147-0.2987No
16HIST1H2BJENSG00000124635.8168240.122-0.3185No
17RFC5ENSG00000111445.14168830.120-0.3174No
18RPA2ENSG00000117748.10169450.118-0.3163No
19RAD1ENSG00000113456.19170500.116-0.3164No
20HERC2ENSG00000128731.17171930.112-0.3175No
21MCM7ENSG00000166508.17174950.104-0.3226No
22HIST1H4IENSG00000276180.1176200.100-0.3235No
23HIST1H2BGENSG00000273802.2177960.096-0.3257No
24TOP3AENSG00000177302.15181160.088-0.3316No
25MDC1ENSG00000137337.15182060.085-0.3320No
26ABRAXAS1ENSG00000163322.14187100.073-0.3427No
27PSME2ENSG00000100911.16192740.057-0.3552No
28PSMA3ENSG00000100567.13194010.054-0.3571No
29PSMA2ENSG00000106588.11195620.050-0.3600No
30ORC2ENSG00000115942.9196070.048-0.3600No
31MRE11ENSG00000020922.12198960.041-0.3662No
32PSMB10ENSG00000205220.12199370.040-0.3663No
33HIST1H2BEENSG00000274290.2200740.038-0.3688No
34HIST1H2BLENSG00000185130.5202060.034-0.3713No
35HIST1H4JENSG00000197238.4204580.026-0.3768No
36PSMC4ENSG00000013275.8208100.018-0.3850No
37HIST1H2BFENSG00000277224.2209280.014-0.3876No
38UBCENSG00000150991.15209480.013-0.3878No
39PSMA6ENSG00000100902.11209760.013-0.3881No
40PSMB4ENSG00000159377.11211270.007-0.3916No
41HIST1H2BOENSG00000274641.1211900.007-0.3930No
42SFNENSG00000175793.12213060.004-0.3957No
43NBNENSG00000104320.1321733-0.007-0.4060No
44UBBENSG00000170315.1422145-0.016-0.4156No
45RAD50ENSG00000113522.1422224-0.019-0.4172No
46UBA52ENSG00000221983.822256-0.020-0.4175No
47HIST2H2BEENSG00000184678.1022644-0.030-0.4263No
48TOPBP1ENSG00000163781.1422850-0.035-0.4306No
49PSMD3ENSG00000108344.1523004-0.040-0.4335No
50PSME1ENSG00000092010.1523061-0.041-0.4339No
51HIST1H4LENSG00000275126.123088-0.042-0.4337No
52PSMA1ENSG00000129084.1723337-0.048-0.4387No
53PSMB9ENSG00000240065.823347-0.048-0.4379No
54HIST1H2BBENSG00000276410.323366-0.049-0.4373No
55ORC5ENSG00000164815.1123413-0.050-0.4374No
56BABAM1ENSG00000105393.1623442-0.051-0.4370No
57BABAM2ENSG00000158019.2023893-0.063-0.4466No
58RNF8ENSG00000112130.1724033-0.065-0.4486No
59WRNENSG00000165392.1024224-0.071-0.4517No
60SEM1ENSG00000127922.924231-0.071-0.4504No
61ATMENSG00000149311.1824258-0.072-0.4495No
62PSMB7ENSG00000136930.1324754-0.084-0.4597No
63RPS27AENSG00000143947.1324801-0.086-0.4590No
64PSMB1ENSG00000008018.925518-0.106-0.4742No
65HIST1H2BNENSG00000233822.425715-0.111-0.4767No
66PSMB6ENSG00000142507.1025718-0.112-0.4743No
67DNA2ENSG00000138346.1525812-0.114-0.4742No
68PSMD8ENSG00000099341.1125815-0.114-0.4718No
69HIST1H2BCENSG00000180596.725836-0.115-0.4698No
70DBF4ENSG00000006634.825980-0.120-0.4708No
71TP53BP1ENSG00000067369.1326057-0.123-0.4700No
72ATRIPENSG00000164053.2126108-0.124-0.4686No
73PSMB2ENSG00000126067.1226219-0.126-0.4686No
74HIST1H4KENSG00000273542.126308-0.129-0.4680No
75PSMD2ENSG00000175166.1726310-0.129-0.4653No
76PSMD9ENSG00000110801.1426323-0.129-0.4628No
77PSMA7ENSG00000101182.1526454-0.134-0.4631No
78PSMC1ENSG00000100764.1426467-0.134-0.4606No
79H2AFXENSG00000188486.326590-0.138-0.4606No
80RFC2ENSG00000049541.1126606-0.138-0.4580No
81PSMF1ENSG00000125818.1826669-0.140-0.4566No
82PSMD4ENSG00000159352.1526816-0.144-0.4571No
83TP53ENSG00000141510.1727245-0.156-0.4642No
84PSMD13ENSG00000185627.1827620-0.168-0.4697No
85PSMD11ENSG00000108671.1127717-0.171-0.4684No
86PSMC5ENSG00000087191.1327761-0.172-0.4658No
87PSMB3ENSG00000277791.527956-0.179-0.4667No
88ORC4ENSG00000115947.1328129-0.185-0.4670No
89PSMD6ENSG00000163636.1028425-0.194-0.4700No
90PSMC6ENSG00000100519.1228449-0.195-0.4664No
91PSMC3ENSG00000165916.828625-0.200-0.4664No
92MCM3ENSG00000112118.2029007-0.212-0.4712No
93RHNO1ENSG00000171792.1129110-0.215-0.4691No
94PSMD7ENSG00000103035.1130001-0.244-0.4856No
95PSMA4ENSG00000041357.1630107-0.247-0.4829No
96RFC4ENSG00000163918.1030672-0.265-0.4910Yes
97YWHAQENSG00000134308.1430852-0.271-0.4896Yes
98MCM8ENSG00000125885.1331052-0.279-0.4885Yes
99RPA1ENSG00000132383.1231119-0.282-0.4841Yes
100HIST1H4FENSG00000274618.131237-0.285-0.4809Yes
101PSMA8ENSG00000154611.1431324-0.285-0.4769Yes
102BRCC3ENSG00000185515.1432158-0.302-0.4908Yes
103CDK2ENSG00000123374.1132246-0.307-0.4864Yes
104YWHAGENSG00000170027.732308-0.310-0.4813Yes
105MCM2ENSG00000073111.1432546-0.318-0.4803Yes
106RAD17ENSG00000152942.1932645-0.322-0.4758Yes
107RNF168ENSG00000163961.432669-0.323-0.4695Yes
108PSMD10ENSG00000101843.1932694-0.324-0.4632Yes
109PSMD12ENSG00000197170.1032756-0.326-0.4577Yes
110UIMC1ENSG00000087206.1732823-0.329-0.4523Yes
111RBBP8ENSG00000101773.1932876-0.331-0.4466Yes
112RMI2ENSG00000175643.1033556-0.338-0.4559Yes
113HUS1ENSG00000136273.1334665-0.355-0.4754Yes
114MCM6ENSG00000076003.534728-0.357-0.4693Yes
115PSMB5ENSG00000100804.1935039-0.367-0.4690Yes
116UBE2V2ENSG00000169139.1235086-0.368-0.4623Yes
117PSMD5ENSG00000095261.1435294-0.378-0.4593Yes
118SUMO1ENSG00000116030.1635376-0.382-0.4531Yes
119PSME3ENSG00000131467.1135430-0.385-0.4462Yes
120YWHABENSG00000166913.1335457-0.386-0.4386Yes
121PSMA5ENSG00000143106.1335640-0.395-0.4346Yes
122YWHAZENSG00000164924.1835696-0.397-0.4275Yes
123HIST1H2BIENSG00000278588.135748-0.400-0.4202Yes
124BLMENSG00000197299.1235803-0.402-0.4130Yes
125MCM5ENSG00000100297.1635805-0.402-0.4044Yes
126PSMC2ENSG00000161057.1235948-0.403-0.3993Yes
127CDC25CENSG00000158402.2035954-0.403-0.3908Yes
128HIST1H4CENSG00000197061.436084-0.408-0.3853Yes
129UBE2NENSG00000177889.1036090-0.408-0.3767Yes
130ORC3ENSG00000135336.1436389-0.421-0.3750Yes
131PSMD14ENSG00000115233.1236419-0.422-0.3667Yes
132YWHAEENSG00000108953.1736492-0.426-0.3594Yes
133CCNB2ENSG00000157456.836613-0.432-0.3531Yes
134RPA3ENSG00000106399.1136661-0.434-0.3450Yes
135ATRENSG00000175054.1636761-0.438-0.3381Yes
136HIST2H4AENSG00000270882.237017-0.453-0.3347Yes
137ORC1ENSG00000085840.1337179-0.462-0.3288Yes
138PKMYT1ENSG00000127564.1737418-0.479-0.3244Yes
139RFC3ENSG00000133119.1337532-0.487-0.3168Yes
140PSMD1ENSG00000173692.1337725-0.504-0.3107Yes
141BRIP1ENSG00000136492.837949-0.524-0.3050Yes
142CDC7ENSG00000097046.1338052-0.531-0.2961Yes
143PSME4ENSG00000068878.1538072-0.532-0.2852Yes
144CCNB1ENSG00000134057.1538169-0.540-0.2761Yes
145NSD2ENSG00000109685.1838242-0.546-0.2662Yes
146CHEK1ENSG00000149554.1338279-0.549-0.2554Yes
147GTSE1ENSG00000075218.1938414-0.557-0.2468Yes
148CDC45ENSG00000093009.1038822-0.583-0.2443Yes
149ORC6ENSG00000091651.938888-0.589-0.2333Yes
150RAD9BENSG00000151164.1839057-0.607-0.2245Yes
151EXO1ENSG00000174371.1739163-0.615-0.2140Yes
152CDK1ENSG00000170312.1639453-0.632-0.2076Yes
153CLSPNENSG00000092853.1439505-0.635-0.1953Yes
154BARD1ENSG00000138376.1139685-0.660-0.1856Yes
155BRCA1ENSG00000012048.2239857-0.687-0.1751Yes
156WEE1ENSG00000166483.1140002-0.714-0.1634Yes
157CDC6ENSG00000094804.1240060-0.723-0.1494Yes
158CDC25AENSG00000164045.1240263-0.768-0.1380Yes
159YWHAHENSG00000128245.1540295-0.774-0.1222Yes
160MCM4ENSG00000104738.1840591-0.872-0.1108Yes
161RMI1ENSG00000178966.1640663-0.903-0.0933Yes
162MCM10ENSG00000065328.1640670-0.907-0.0741Yes
163HIST1H4BENSG00000278705.140718-0.927-0.0555Yes
164PSMB11ENSG00000222028.540874-1.018-0.0376Yes
165HIST1H4AENSG00000278637.141148-2.0930.0003Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_G2_M_CHECKPOINTS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_G2_M_CHECKPOINTS: Random ES distribution   
Gene set null distribution of ES for REACTOME_G2_M_CHECKPOINTS