DatasetNormalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
PhenotypePhenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in classARH
GeneSetREACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT
Enrichment Score (ES)-0.45917264
Normalized Enrichment Score (NES)-2.283536
Nominal p-value0.0
FDR q-value2.8747105E-4
FWER p-Value0.006
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PLA2G6ENSG00000184381.2019180.714-0.0310No
2KIF12ENSG00000136883.1420940.694-0.0201No
3KIF19ENSG00000196169.1535930.563-0.0442No
4KIF5AENSG00000155980.1236650.560-0.0336No
5PLA2G4AENSG00000116711.1045870.514-0.0448No
6KIFC2ENSG00000167702.1250260.489-0.0447No
7KIF26AENSG00000066735.1453660.467-0.0427No
8KIF16BENSG00000089177.1856810.449-0.0405No
9KIF21BENSG00000116852.1458150.443-0.0340No
10KIF26BENSG00000162849.1659720.435-0.0283No
11KLC4ENSG00000137171.1565560.406-0.0336No
12DYNC1I1ENSG00000158560.1470760.386-0.0377No
13ARFGAP1ENSG00000101199.1376780.364-0.0444No
14TUBB1ENSG00000101162.381270.356-0.0475No
15TUBA3DENSG00000075886.11106930.303-0.1033No
16USE1ENSG00000053501.13120700.268-0.1310No
17KIF1AENSG00000130294.16122890.261-0.1306No
18NAPBENSG00000125814.17134870.222-0.1549No
19KLC1ENSG00000126214.21148190.180-0.1833No
20AC027237.1ENSG00000259191.2152800.165-0.1909No
21TUBB3ENSG00000258947.7156080.156-0.1955No
22ARFGAP2ENSG00000149182.15174820.104-0.2388No
23TMED9ENSG00000184840.12187110.073-0.2671No
24TUBA4BENSG00000243910.8192890.057-0.2800No
25KDELR1ENSG00000105438.9193150.056-0.2793No
26KIF25ENSG00000125337.19210570.010-0.3216No
27TUBA4AENSG00000127824.14212840.004-0.3270No
28NAPGENSG00000134265.13214120.001-0.3300No
29ARF5ENSG00000004059.1121663-0.006-0.3360No
30KLC2ENSG00000174996.1122207-0.018-0.3488No
31AGPAT3ENSG00000160216.1922294-0.021-0.3505No
32TMED2ENSG00000086598.1122331-0.022-0.3509No
33RAB6BENSG00000154917.1122675-0.030-0.3586No
34KDELR3ENSG00000100196.1122740-0.032-0.3594No
35DCTN3ENSG00000137100.1622796-0.033-0.3601No
36KIF9ENSG00000088727.1222944-0.037-0.3628No
37ARF1ENSG00000143761.1623029-0.040-0.3640No
38GALNT1ENSG00000141429.1323031-0.040-0.3631No
39GALNT2ENSG00000143641.1023333-0.048-0.3694No
40DYNLL2ENSG00000264364.323336-0.048-0.3684No
41SURF4ENSG00000148248.1423692-0.058-0.3758No
42COPEENSG00000105669.1423839-0.062-0.3780No
43BICD1ENSG00000151746.1423875-0.062-0.3775No
44KIF27ENSG00000165115.1524228-0.071-0.3845No
45PAFAH1B3ENSG00000079462.724885-0.088-0.3985No
46TMED3ENSG00000166557.1325030-0.093-0.4000No
47COPAENSG00000122218.1625255-0.097-0.4033No
48DYNC1LI2ENSG00000135720.1325352-0.101-0.4035No
49NAPAENSG00000105402.826346-0.131-0.4248No
50TUBA8ENSG00000183785.1526534-0.136-0.4264No
51ARF3ENSG00000134287.1026805-0.144-0.4298No
52STX18ENSG00000168818.1026910-0.147-0.4291No
53KDELR2ENSG00000136240.1026978-0.149-0.4275No
54NBASENSG00000151779.1327131-0.153-0.4278No
55RINT1ENSG00000135249.827607-0.168-0.4357No
56KIFAP3ENSG00000075945.1327710-0.171-0.4344No
57RAB1BENSG00000174903.1627815-0.174-0.4331No
58TUBA3CENSG00000198033.1227829-0.175-0.4296No
59KIF21AENSG00000139116.1827919-0.177-0.4279No
60COPZ1ENSG00000111481.1028332-0.190-0.4337No
61RAB3GAP2ENSG00000118873.1628368-0.192-0.4304No
62DCTN4ENSG00000132912.1228497-0.197-0.4292No
63SEC22BENSG00000265808.429171-0.217-0.4408No
64TUBA3EENSG00000152086.929330-0.222-0.4398No
65RAB18ENSG00000099246.1630126-0.248-0.4537Yes
66RAB1AENSG00000138069.1830150-0.249-0.4488Yes
67GBF1ENSG00000107862.430343-0.255-0.4479Yes
68TMED10ENSG00000170348.930459-0.259-0.4450Yes
69BICD2ENSG00000185963.1430528-0.260-0.4409Yes
70TUBB8ENSG00000261456.530717-0.267-0.4397Yes
71COPG1ENSG00000181789.1430735-0.267-0.4342Yes
72ARFGAP3ENSG00000242247.1130822-0.270-0.4304Yes
73ZW10ENSG00000086827.930856-0.271-0.4252Yes
74KIF22ENSG00000079616.1230925-0.274-0.4208Yes
75DCTN5ENSG00000166847.1031044-0.279-0.4176Yes
76KIF3CENSG00000084731.1531061-0.279-0.4119Yes
77TUBB4AENSG00000104833.1231106-0.281-0.4067Yes
78DYNC1H1ENSG00000197102.1231822-0.290-0.4178Yes
79COPB2ENSG00000184432.1032009-0.297-0.4158Yes
80DCTN2ENSG00000175203.1532923-0.333-0.4307Yes
81TUBAL3ENSG00000178462.1233185-0.336-0.4297Yes
82PAFAH1B2ENSG00000168092.1434182-0.349-0.4463Yes
83KIF1CENSG00000129250.1234212-0.350-0.4394Yes
84KIF1BENSG00000054523.1734654-0.354-0.4423Yes
85KIF3AENSG00000131437.1535070-0.368-0.4444Yes
86TMED7ENSG00000134970.1435148-0.371-0.4381Yes
87CAPZBENSG00000077549.1835414-0.384-0.4361Yes
88RAB6AENSG00000175582.1935427-0.385-0.4279Yes
89RAB3GAP1ENSG00000115839.1735438-0.385-0.4197Yes
90DCTN1ENSG00000204843.1235697-0.397-0.4173Yes
91KIF20AENSG00000112984.1235970-0.404-0.4150Yes
92PAFAH1B1ENSG00000007168.1336076-0.408-0.4086Yes
93DYNC1I2ENSG00000077380.1536153-0.411-0.4014Yes
94DCTN6ENSG00000104671.836330-0.417-0.3965Yes
95NSFENSG00000073969.1836513-0.428-0.3916Yes
96ARCN1ENSG00000095139.1436550-0.430-0.3830Yes
97COPB1ENSG00000129083.1236728-0.437-0.3777Yes
98KIF2CENSG00000142945.1336852-0.443-0.3710Yes
99KIF18BENSG00000186185.1436892-0.446-0.3622Yes
100ACTR1AENSG00000138107.1336970-0.450-0.3541Yes
101KIF2AENSG00000068796.1636994-0.452-0.3448Yes
102BNIP1ENSG00000113734.1737050-0.455-0.3361Yes
103KIF13BENSG00000197892.1337199-0.463-0.3295Yes
104TUBA1BENSG00000123416.1537411-0.478-0.3242Yes
105ARF4ENSG00000168374.1137528-0.487-0.3163Yes
106KIF4AENSG00000090889.1237615-0.495-0.3075Yes
107KIF3BENSG00000101350.837801-0.512-0.3008Yes
108CAPZA2ENSG00000198898.1438185-0.541-0.2982Yes
109KIF15ENSG00000163808.1738204-0.543-0.2867Yes
110DYNC1LI1ENSG00000144635.938271-0.548-0.2763Yes
111DYNLL1ENSG00000088986.1138317-0.554-0.2652Yes
112KIFC1ENSG00000237649.838364-0.556-0.2541Yes
113TUBA1AENSG00000167552.1438598-0.561-0.2475Yes
114COPZ2ENSG00000005243.1039066-0.608-0.2455Yes
115CAPZA1ENSG00000116489.1339314-0.624-0.2378Yes
116ACTR10ENSG00000131966.1439413-0.627-0.2264Yes
117RACGAP1ENSG00000161800.1339469-0.633-0.2139Yes
118KIF4BENSG00000226650.639776-0.670-0.2066Yes
119KIF6ENSG00000164627.1839943-0.703-0.1952Yes
120COPG2ENSG00000158623.1440017-0.716-0.1813Yes
121TUBB4BENSG00000188229.640106-0.733-0.1673Yes
122TUBB2BENSG00000137285.1040109-0.733-0.1512Yes
123CENPEENSG00000138778.1240145-0.740-0.1358Yes
124TUBB2AENSG00000137267.640266-0.768-0.1219Yes
125TUBA1CENSG00000167553.1540512-0.843-0.1093Yes
126KIF11ENSG00000138160.640519-0.845-0.0909Yes
127KLC3ENSG00000104892.1740542-0.855-0.0726Yes
128KIF5BENSG00000170759.1140785-0.954-0.0576Yes
129TUBB6ENSG00000176014.1340817-0.979-0.0368Yes
130KIF20BENSG00000138182.1440873-1.017-0.0158Yes
131KIF18AENSG00000121621.740921-1.0380.0058Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT: Random ES distribution   
Gene set null distribution of ES for REACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT