DatasetNormalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
PhenotypePhenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in classARH
GeneSetREACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS
Enrichment Score (ES)-0.4705494
Normalized Enrichment Score (NES)-2.3685346
Nominal p-value0.0
FDR q-value6.963224E-5
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1APOBEC3GENSG00000239713.917200.745-0.0177No
2ELMO1ENSG00000155849.1528050.622-0.0238No
3HLA-AENSG00000206503.1380220.360-0.1392No
4LCKENSG00000182866.17118480.276-0.2234No
5PSMB8ENSG00000204264.11140580.204-0.2706No
6HCKENSG00000101336.14143770.195-0.2720No
7AAASENSG00000094914.14153620.163-0.2907No
8RANGAP1ENSG00000100401.19157330.152-0.2948No
9CD247ENSG00000198821.10157550.152-0.2903No
10POM121CENSG00000272391.6166280.128-0.3074No
11POM121ENSG00000196313.11171390.114-0.3161No
12HMGA1ENSG00000137309.19180180.090-0.3346No
13NUP160ENSG00000030066.13188450.069-0.3525No
14NUP214ENSG00000126883.17192300.059-0.3599No
15PSME2ENSG00000100911.16192740.057-0.3591No
16PSMA3ENSG00000100567.13194010.054-0.3604No
17PSMA2ENSG00000106588.11195620.050-0.3627No
18PSMB10ENSG00000205220.12199370.040-0.3705No
19NUP43ENSG00000120253.14200470.038-0.3719No
20NPM1ENSG00000181163.13202960.031-0.3770No
21PSMC4ENSG00000013275.8208100.018-0.3889No
22UBCENSG00000150991.15209480.013-0.3918No
23PSMA6ENSG00000100902.11209760.013-0.3921No
24PSMB4ENSG00000159377.11211270.007-0.3955No
25CDK9ENSG00000136807.14211970.007-0.3969No
26NUP35ENSG00000163002.13212530.005-0.3981No
27NUP62ENSG00000213024.1121980-0.014-0.4153No
28UBBENSG00000170315.1422145-0.016-0.4188No
29UBA52ENSG00000221983.822256-0.020-0.4208No
30SEC13ENSG00000157020.1822468-0.026-0.4251No
31BANF1ENSG00000175334.822894-0.036-0.4343No
32B2MENSG00000166710.2022947-0.038-0.4344No
33PSMD3ENSG00000108344.1523004-0.040-0.4344No
34ARF1ENSG00000143761.1623029-0.040-0.4337No
35RAE1ENSG00000101146.1323056-0.041-0.4330No
36PSME1ENSG00000092010.1523061-0.041-0.4318No
37AP2S1ENSG00000042753.1123077-0.042-0.4308No
38PSMA1ENSG00000129084.1723337-0.048-0.4355No
39PSMB9ENSG00000240065.823347-0.048-0.4342No
40SEH1LENSG00000085415.1623768-0.059-0.4425No
41CCNT1ENSG00000129315.1124047-0.066-0.4471No
42SEM1ENSG00000127922.924231-0.071-0.4493No
43PSMB7ENSG00000136930.1324754-0.084-0.4593No
44RPS27AENSG00000143947.1324801-0.086-0.4576No
45NUP133ENSG00000069248.1224802-0.086-0.4548No
46NUP54ENSG00000138750.1525127-0.094-0.4596No
47PSMB1ENSG00000008018.925518-0.106-0.4657No
48PSMB6ENSG00000142507.1025718-0.112-0.4669Yes
49PSMD8ENSG00000099341.1125815-0.114-0.4655Yes
50BTRCENSG00000166167.1825965-0.119-0.4653Yes
51ELOBENSG00000103363.1425982-0.120-0.4618Yes
52PSIP1ENSG00000164985.1526088-0.123-0.4603Yes
53PSMB2ENSG00000126067.1226219-0.126-0.4594Yes
54PSMD2ENSG00000175166.1726310-0.129-0.4574Yes
55PSMD9ENSG00000110801.1426323-0.129-0.4535Yes
56PSMA7ENSG00000101182.1526454-0.134-0.4523Yes
57PSMC1ENSG00000100764.1426467-0.134-0.4482Yes
58PSMF1ENSG00000125818.1826669-0.140-0.4485Yes
59NUP58ENSG00000139496.1626686-0.140-0.4444Yes
60CD8BENSG00000172116.2326744-0.142-0.4411Yes
61PSMD4ENSG00000159352.1526816-0.144-0.4382Yes
62AP2M1ENSG00000161203.1326819-0.144-0.4335Yes
63NUP107ENSG00000111581.1026867-0.145-0.4299Yes
64CUL5ENSG00000166266.1427037-0.150-0.4292Yes
65TPRENSG00000047410.1427114-0.153-0.4260Yes
66AP2A1ENSG00000196961.1227276-0.157-0.4249Yes
67AP2A2ENSG00000183020.1327410-0.161-0.4228Yes
68PSMD13ENSG00000185627.1827620-0.168-0.4225Yes
69PSMD11ENSG00000108671.1127717-0.171-0.4192Yes
70PSMC5ENSG00000087191.1327761-0.172-0.4147Yes
71NUP85ENSG00000125450.1127774-0.173-0.4093Yes
72NUP188ENSG00000095319.1427939-0.178-0.4075Yes
73PSMB3ENSG00000277791.527956-0.179-0.4021Yes
74NUP98ENSG00000110713.1728185-0.186-0.4016Yes
75PSMD6ENSG00000163636.1028425-0.194-0.4011Yes
76PSMC6ENSG00000100519.1228449-0.195-0.3954Yes
77NUP88ENSG00000108559.1228505-0.197-0.3903Yes
78PSMC3ENSG00000165916.828625-0.200-0.3867Yes
79SKP1ENSG00000113558.1828827-0.206-0.3849Yes
80NUP153ENSG00000124789.1129336-0.222-0.3900Yes
81PACS1ENSG00000175115.1229524-0.228-0.3871Yes
82PSMD7ENSG00000103035.1130001-0.244-0.3908Yes
83PSMA4ENSG00000041357.1630107-0.247-0.3853Yes
84AP1G1ENSG00000166747.1230442-0.258-0.3850Yes
85RANBP1ENSG00000099901.1730689-0.265-0.3824Yes
86NUP210ENSG00000132182.1231109-0.281-0.3834Yes
87PSMA8ENSG00000154611.1431324-0.285-0.3794Yes
88SLC25A5ENSG00000005022.631924-0.294-0.3844Yes
89KPNB1ENSG00000108424.1031990-0.296-0.3764Yes
90NUP93ENSG00000102900.1332074-0.299-0.3686Yes
91NUP155ENSG00000113569.1632287-0.309-0.3638Yes
92SLC25A4ENSG00000151729.1132397-0.314-0.3562Yes
93RBX1ENSG00000100387.932483-0.316-0.3480Yes
94RANBP2ENSG00000153201.1632550-0.318-0.3392Yes
95PSMD10ENSG00000101843.1932694-0.324-0.3322Yes
96PSMD12ENSG00000197170.1032756-0.326-0.3230Yes
97AP1B1ENSG00000100280.1634073-0.344-0.3439Yes
98PSMB5ENSG00000100804.1935039-0.367-0.3555Yes
99NDC1ENSG00000058804.1235259-0.376-0.3486Yes
100PSMD5ENSG00000095261.1435294-0.378-0.3371Yes
101ATP6V1HENSG00000047249.1835368-0.382-0.3264Yes
102PSME3ENSG00000131467.1135430-0.385-0.3154Yes
103NUP37ENSG00000075188.935611-0.394-0.3070Yes
104PSMA5ENSG00000143106.1335640-0.395-0.2948Yes
105PSMC2ENSG00000161057.1235948-0.403-0.2891Yes
106AP2B1ENSG00000006125.1835998-0.406-0.2771Yes
107PSMD14ENSG00000115233.1236419-0.422-0.2736Yes
108NUP205ENSG00000155561.1536490-0.426-0.2615Yes
109AP1S1ENSG00000106367.1536495-0.426-0.2477Yes
110RANENSG00000132341.1236507-0.427-0.2340Yes
111DOCK2ENSG00000134516.1736842-0.442-0.2278Yes
112PAK2ENSG00000180370.1036983-0.451-0.2165Yes
113PPIAENSG00000196262.1437055-0.456-0.2034Yes
114KPNA1ENSG00000114030.1337126-0.459-0.1901Yes
115RCC1ENSG00000180198.1637211-0.464-0.1771Yes
116XPO1ENSG00000082898.1737227-0.465-0.1623Yes
117RAC1ENSG00000136238.1837298-0.471-0.1487Yes
118AP1S3ENSG00000152056.1737559-0.489-0.1390Yes
119NUP50ENSG00000093000.1937691-0.501-0.1259Yes
120PSMD1ENSG00000173692.1337725-0.504-0.1103Yes
121ELOCENSG00000154582.1637865-0.517-0.0968Yes
122FYNENSG00000010810.1737878-0.518-0.0802Yes
123PSME4ENSG00000068878.1538072-0.532-0.0676Yes
124AP1M1ENSG00000072958.838869-0.587-0.0679Yes
125CD28ENSG00000178562.1839168-0.615-0.0551Yes
126AP1S2ENSG00000182287.1539189-0.618-0.0355Yes
127CD4ENSG00000010610.1039926-0.700-0.0307Yes
128AP1M2ENSG00000129354.1140522-0.847-0.0176Yes
129PSMB11ENSG00000222028.540874-1.0180.0070Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS: Random ES distribution   
Gene set null distribution of ES for REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS