Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Normalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH |
| Phenotype | Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH |
| Upregulated in class | FSHD2 |
| GeneSet | REACTOME_TRANSCRIPTIONAL_REGULATION_OF_PLURIPOTENT_STEM_CELLS |
| Enrichment Score (ES) | 0.4773304 |
| Normalized Enrichment Score (NES) | 1.594075 |
| Nominal p-value | 0.02152318 |
| FDR q-value | 0.1917929 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | SALL4 | ENSG00000101115.13 | 97 | 1.445 | 0.1438 | Yes | ||
| 2 | HIF3A | ENSG00000124440.15 | 1331 | 0.797 | 0.1944 | Yes | ||
| 3 | SALL1 | ENSG00000103449.11 | 1558 | 0.765 | 0.2663 | Yes | ||
| 4 | STAT3 | ENSG00000168610.14 | 3305 | 0.583 | 0.2828 | Yes | ||
| 5 | FOXP1 | ENSG00000114861.20 | 4083 | 0.538 | 0.3184 | Yes | ||
| 6 | EPHA1 | ENSG00000146904.9 | 4375 | 0.521 | 0.3640 | Yes | ||
| 7 | NANOG | ENSG00000111704.11 | 6050 | 0.431 | 0.3668 | Yes | ||
| 8 | ZIC3 | ENSG00000156925.12 | 6345 | 0.415 | 0.4016 | Yes | ||
| 9 | HHEX | ENSG00000152804.11 | 6564 | 0.405 | 0.4373 | Yes | ||
| 10 | SOX2 | ENSG00000181449.4 | 6831 | 0.395 | 0.4708 | Yes | ||
| 11 | DPPA4 | ENSG00000121570.12 | 8055 | 0.359 | 0.4773 | Yes | ||
| 12 | KLF4 | ENSG00000136826.15 | 13176 | 0.233 | 0.3764 | No | ||
| 13 | GATA6 | ENSG00000141448.10 | 15035 | 0.172 | 0.3487 | No | ||
| 14 | NR5A1 | ENSG00000136931.10 | 18222 | 0.085 | 0.2798 | No | ||
| 15 | EOMES | ENSG00000163508.13 | 18998 | 0.065 | 0.2676 | No | ||
| 16 | PBX1 | ENSG00000185630.18 | 20063 | 0.038 | 0.2456 | No | ||
| 17 | NR6A1 | ENSG00000148200.17 | 21014 | 0.012 | 0.2236 | No | ||
| 18 | SMAD4 | ENSG00000141646.13 | 21636 | -0.005 | 0.2090 | No | ||
| 19 | ZSCAN10 | ENSG00000130182.8 | 21916 | -0.012 | 0.2034 | No | ||
| 20 | FOXD3 | ENSG00000187140.6 | 22550 | -0.027 | 0.1908 | No | ||
| 21 | POU5F1 | ENSG00000204531.18 | 23729 | -0.058 | 0.1681 | No | ||
| 22 | SMAD2 | ENSG00000175387.16 | 24905 | -0.088 | 0.1485 | No | ||
| 23 | GSC | ENSG00000133937.4 | 28109 | -0.184 | 0.0892 | No | ||
| 24 | EPAS1 | ENSG00000116016.14 | 28406 | -0.193 | 0.1015 | No | ||
| 25 | LIN28A | ENSG00000131914.11 | 30193 | -0.250 | 0.0834 | No | ||
| 26 | FGF2 | ENSG00000138685.15 | 34208 | -0.350 | 0.0212 | No | ||
| 27 | DKK1 | ENSG00000107984.10 | 36810 | -0.441 | 0.0025 | No | ||
| 28 | TSC22D1 | ENSG00000102804.15 | 40879 | -1.021 | 0.0069 | No |
