Details for gene set BIOCARTA_COMP_PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	Normalized.Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Phenotype	Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Upregulated in class	FSHD2
GeneSet	BIOCARTA_COMP_PATHWAY
Enrichment Score (ES)	0.7136002
Normalized Enrichment Score (NES)	2.0230138
Nominal p-value	0.0
FDR q-value	0.0047104163
FWER p-Value	0.054

Fig 1: Enrichment plot: BIOCARTA_COMP_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	C1S	ENSG00000182326.15			34	4.267	0.1669	Yes
2	MASP1	ENSG00000127241.16			191	3.323	0.2939	Yes
3	CFB	ENSG00000243649.8			196	3.306	0.4238	Yes
4	C1R	ENSG00000159403.18			251	3.121	0.5452	Yes
5	C5	ENSG00000106804.7			443	2.687	0.6464	Yes
6	CFD	ENSG00000197766.8			1895	1.671	0.6784	Yes
7	MASP2	ENSG00000009724.17			3469	1.231	0.6903	Yes
8	C3	ENSG00000125730.17			4292	1.078	0.7136	Yes
9	C4A	ENSG00000244731.8			8939	0.572	0.6283	No
10	C2	ENSG00000166278.15			10689	0.466	0.6060	No
11	MBL2	ENSG00000165471.6			13582	0.322	0.5516	No
12	C8A	ENSG00000157131.10			14876	0.287	0.5329	No
13	C4B	ENSG00000224389.9			23628	-0.148	0.3357	No
14	C6	ENSG00000039537.13			25989	-0.260	0.2911	No
15	C1QA	ENSG00000173372.17			28844	-0.351	0.2387	No
16	C9	ENSG00000113600.11			35681	-0.807	0.1118	No
17	C7	ENSG00000112936.19			39983	-1.544	0.0728	No

Fig 2: BIOCARTA_COMP_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: BIOCARTA_COMP_PATHWAY: Random ES distribution   
Gene set null distribution of ES for BIOCARTA_COMP_PATHWAY