Details for gene set KEGG

Table: GSEA Results Summary

Dataset	Normalized.Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Phenotype	Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Upregulated in class	FSHD2
GeneSet	KEGG_LYSOSOME
Enrichment Score (ES)	0.48280397
Normalized Enrichment Score (NES)	2.0169766
Nominal p-value	0.0
FDR q-value	0.004864547
FWER p-Value	0.061

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SLC17A5	ENSG00000119899.13	119	3.608	0.0220	Yes
2	CTSB	ENSG00000164733.21	145	3.504	0.0454	Yes
3	CTSK	ENSG00000143387.13	210	3.273	0.0664	Yes
4	HEXB	ENSG00000049860.14	415	2.734	0.0804	Yes
5	CTSS	ENSG00000163131.11	442	2.687	0.0982	Yes
6	CTSL	ENSG00000135047.15	458	2.665	0.1162	Yes
7	NAGLU	ENSG00000108784.10	504	2.596	0.1329	Yes
8	LIPA	ENSG00000107798.18	528	2.571	0.1500	Yes
9	SGSH	ENSG00000181523.13	719	2.352	0.1617	Yes
10	CTSF	ENSG00000174080.11	899	2.175	0.1725	Yes
11	NPC2	ENSG00000119655.10	904	2.166	0.1873	Yes
12	CTSO	ENSG00000256043.3	953	2.131	0.2008	Yes
13	GBA	ENSG00000177628.16	1072	2.067	0.2122	Yes
14	MAN2B1	ENSG00000104774.13	1074	2.066	0.2263	Yes
15	DNASE2	ENSG00000105612.9	1147	2.018	0.2385	Yes
16	IDUA	ENSG00000127415.13	1270	1.956	0.2491	Yes
17	ARSG	ENSG00000141337.12	1326	1.924	0.2610	Yes
18	AP3S1	ENSG00000177879.16	1336	1.916	0.2739	Yes
19	SUMF1	ENSG00000144455.14	1354	1.904	0.2866	Yes
20	TPP1	ENSG00000166340.17	1461	1.860	0.2969	Yes
21	GNPTG	ENSG00000090581.10	1478	1.853	0.3092	Yes
22	NAGA	ENSG00000198951.12	1559	1.815	0.3198	Yes
23	CD164	ENSG00000135535.17	1647	1.782	0.3300	Yes
24	GAA	ENSG00000171298.13	1658	1.772	0.3419	Yes
25	AP1S1	ENSG00000106367.15	1803	1.716	0.3504	Yes
26	AP3B2	ENSG00000103723.15	1945	1.652	0.3584	Yes
27	GLB1	ENSG00000170266.16	1972	1.642	0.3691	Yes
28	TCIRG1	ENSG00000110719.10	1974	1.641	0.3803	Yes
29	ABCA2	ENSG00000107331.17	2112	1.595	0.3881	Yes
30	GM2A	ENSG00000196743.9	2138	1.587	0.3984	Yes
31	CLTA	ENSG00000122705.17	2253	1.549	0.4063	Yes
32	CLN3	ENSG00000188603.19	2258	1.546	0.4169	Yes
33	HEXA	ENSG00000213614.9	2587	1.446	0.4191	Yes
34	FUCA1	ENSG00000179163.11	2594	1.443	0.4289	Yes
35	ARSA	ENSG00000100299.18	3068	1.317	0.4269	Yes
36	SMPD1	ENSG00000166311.10	3178	1.292	0.4333	Yes
37	ABCB9	ENSG00000150967.18	3261	1.275	0.4401	Yes
38	CTNS	ENSG00000040531.14	3394	1.246	0.4456	Yes
39	NAGPA	ENSG00000103174.13	3475	1.229	0.4522	Yes
40	GUSB	ENSG00000169919.17	3543	1.217	0.4589	Yes
41	CTSA	ENSG00000064601.18	3731	1.177	0.4627	Yes
42	CLN5	ENSG00000102805.15	3756	1.173	0.4702	Yes
43	HGSNAT	ENSG00000165102.15	3889	1.147	0.4750	Yes
44	AGA	ENSG00000038002.9	4232	1.087	0.4745	Yes
45	HYAL1	ENSG00000114378.17	4537	1.037	0.4745	Yes
46	AP1S2	ENSG00000182287.15	4715	1.011	0.4773	Yes
47	CD68	ENSG00000129226.14	5359	0.919	0.4687	Yes
48	SLC11A2	ENSG00000110911.16	5394	0.914	0.4742	Yes
49	GLA	ENSG00000102393.10	5414	0.912	0.4800	Yes
50	SLC11A1	ENSG00000018280.17	5657	0.881	0.4804	Yes
51	LAPTM4A	ENSG00000068697.7	5809	0.863	0.4828	Yes
52	CTSZ	ENSG00000101160.14	6508	0.788	0.4720	No
53	LAMP1	ENSG00000185896.11	6695	0.768	0.4729	No
54	PSAP	ENSG00000197746.14	7009	0.737	0.4707	No
55	GNPTAB	ENSG00000111670.16	7212	0.718	0.4709	No
56	MCOLN1	ENSG00000090674.16	7458	0.694	0.4700	No
57	CTSC	ENSG00000109861.16	7476	0.693	0.4743	No
58	AP3S2	ENSG00000157823.17	7877	0.658	0.4695	No
59	ACP5	ENSG00000102575.13	8414	0.611	0.4613	No
60	PLA2G15	ENSG00000103066.13	9480	0.540	0.4402	No
61	IDS	ENSG00000010404.18	9593	0.530	0.4412	No
62	MFSD8	ENSG00000164073.10	10574	0.473	0.4217	No
63	ATP6V0C	ENSG00000185883.12	10646	0.469	0.4233	No
64	NAPSA	ENSG00000131400.8	10869	0.454	0.4212	No
65	CD63	ENSG00000135404.11	11956	0.390	0.3986	No
66	CLTC	ENSG00000141367.12	12768	0.357	0.3822	No
67	DNASE2B	ENSG00000137976.7	13308	0.339	0.3720	No
68	PPT2	ENSG00000221988.13	15840	0.258	0.3149	No
69	GGA3	ENSG00000125447.17	15887	0.254	0.3156	No
70	LAMP2	ENSG00000005893.15	16244	0.233	0.3089	No
71	MANBA	ENSG00000109323.11	17058	0.195	0.2913	No
72	LGMN	ENSG00000100600.15	17960	0.148	0.2714	No
73	CTSD	ENSG00000117984.14	18089	0.141	0.2694	No
74	ARSB	ENSG00000113273.17	18569	0.120	0.2591	No
75	ATP6V0D1	ENSG00000159720.12	20013	0.048	0.2259	No
76	NEU1	ENSG00000204386.11	20064	0.045	0.2250	No
77	AP3D1	ENSG00000065000.18	21662	-0.040	0.1881	No
78	NPC1	ENSG00000141458.13	21917	-0.052	0.1826	No
79	GALC	ENSG00000054983.17	22503	-0.084	0.1696	No
80	AP1M1	ENSG00000072958.8	23653	-0.149	0.1439	No
81	GALNS	ENSG00000141012.13	23898	-0.165	0.1393	No
82	ENTPD4	ENSG00000197217.13	23911	-0.166	0.1402	No
83	AP3M1	ENSG00000185009.12	24877	-0.223	0.1193	No
84	CTSW	ENSG00000172543.8	25841	-0.250	0.0986	No
85	SCARB2	ENSG00000138760.10	28055	-0.314	0.0493	No
86	GNS	ENSG00000135677.11	28324	-0.331	0.0453	No
87	AP1S3	ENSG00000152056.17	28567	-0.340	0.0420	No
88	AP4S1	ENSG00000100478.15	30265	-0.426	0.0055	No
89	AP4M1	ENSG00000221838.10	30280	-0.427	0.0081	No
90	PSAPL1	ENSG00000178597.7	30511	-0.436	0.0057	No
91	PPT1	ENSG00000131238.17	31757	-0.501	-0.0198	No
92	ATP6AP1	ENSG00000071553.17	32612	-0.553	-0.0359	No
93	ACP2	ENSG00000134575.12	32966	-0.580	-0.0401	No
94	ATP6V1H	ENSG00000047249.18	33094	-0.590	-0.0390	No
95	LAPTM5	ENSG00000162511.8	33566	-0.626	-0.0457	No
96	AP4B1	ENSG00000134262.13	35950	-0.838	-0.0953	No
97	AP3B1	ENSG00000132842.13	36321	-0.880	-0.0979	No
98	GGA1	ENSG00000100083.19	36475	-0.897	-0.0953	No
99	AP1B1	ENSG00000100280.16	37284	-1.004	-0.1072	No
100	ATP6V0D2	ENSG00000147614.4	37357	-1.014	-0.1019	No
101	IGF2R	ENSG00000197081.14	37384	-1.018	-0.0955	No
102	AP1G1	ENSG00000166747.12	37396	-1.019	-0.0888	No
103	ATP6V0A2	ENSG00000185344.14	37964	-1.111	-0.0944	No
104	M6PR	ENSG00000003056.8	38125	-1.138	-0.0903	No
105	ASAH1	ENSG00000104763.19	38422	-1.192	-0.0890	No
106	LAMP3	ENSG00000078081.8	38690	-1.241	-0.0867	No
107	ATP6V0B	ENSG00000117410.14	39615	-1.446	-0.0983	No
108	ATP6V0A4	ENSG00000105929.16	39655	-1.455	-0.0892	No
109	AP3M2	ENSG00000070718.12	39930	-1.530	-0.0851	No
110	CTSH	ENSG00000103811.16	40296	-1.626	-0.0824	No
111	AP1M2	ENSG00000129354.11	40801	-1.786	-0.0819	No
112	LAPTM4B	ENSG00000104341.17	41005	-1.871	-0.0738	No
113	CTSV	ENSG00000136943.11	41043	-1.887	-0.0617	No
114	ATP6V0A1	ENSG00000033627.16	41061	-1.892	-0.0491	No
115	AP4E1	ENSG00000081014.11	41408	-2.068	-0.0430	No
116	CLTB	ENSG00000175416.13	41519	-2.140	-0.0308	No
117	GGA2	ENSG00000103365.15	41653	-2.222	-0.0187	No
118	CLTCL1	ENSG00000070371.16	42597	-3.327	-0.0178	No
119	SORT1	ENSG00000134243.12	42922	-4.361	0.0046	No