Details for gene set NABA_ECM_GLYCOPROTEINS[GSEA]

Table: GSEA Results Summary

Dataset	Normalized.Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Phenotype	Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Upregulated in class	FSHD2
GeneSet	NABA_ECM_GLYCOPROTEINS
Enrichment Score (ES)	0.46542585
Normalized Enrichment Score (NES)	2.0771675
Nominal p-value	0.0
FDR q-value	0.0042593204
FWER p-Value	0.027

Fig 1: Enrichment plot: NABA_ECM_GLYCOPROTEINS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SLIT3	ENSG00000184347.14			0	4.923	0.0195	Yes
2	MFAP4	ENSG00000166482.11			2	4.870	0.0387	Yes
3	FBLN5	ENSG00000140092.14			11	4.579	0.0566	Yes
4	BMPER	ENSG00000164619.10			17	4.433	0.0740	Yes
5	PCOLCE	ENSG00000106333.13			33	4.267	0.0906	Yes
6	FBLN1	ENSG00000077942.19			63	3.993	0.1057	Yes
7	VWCE	ENSG00000167992.13			118	3.609	0.1187	Yes
8	CTHRC1	ENSG00000164932.13			123	3.593	0.1328	Yes
9	LAMA4	ENSG00000112769.20			127	3.582	0.1469	Yes
10	IGFBP4	ENSG00000141753.7			151	3.478	0.1601	Yes
11	TNXB	ENSG00000168477.19			279	3.050	0.1692	Yes
12	DPT	ENSG00000143196.5			284	3.034	0.1811	Yes
13	PCOLCE2	ENSG00000163710.9			294	3.004	0.1928	Yes
14	LAMB1	ENSG00000091136.14			367	2.820	0.2023	Yes
15	HMCN1	ENSG00000143341.12			385	2.781	0.2129	Yes
16	SLIT2	ENSG00000145147.20			459	2.664	0.2217	Yes
17	NID1	ENSG00000116962.15			541	2.561	0.2300	Yes
18	MATN2	ENSG00000132561.14			579	2.497	0.2390	Yes
19	NTN1	ENSG00000065320.9			605	2.467	0.2481	Yes
20	AEBP1	ENSG00000106624.11			659	2.404	0.2564	Yes
21	SRPX	ENSG00000101955.15			660	2.402	0.2659	Yes
22	VIT	ENSG00000205221.12			783	2.278	0.2721	Yes
23	EMILIN2	ENSG00000132205.11			806	2.257	0.2805	Yes
24	EMILIN1	ENSG00000138080.14			864	2.201	0.2879	Yes
25	FBLN2	ENSG00000163520.14			977	2.116	0.2936	Yes
26	SVEP1	ENSG00000165124.18			984	2.111	0.3018	Yes
27	RSPO1	ENSG00000169218.14			1063	2.074	0.3082	Yes
28	CCN3	ENSG00000136999.5			1071	2.068	0.3162	Yes
29	ECM1	ENSG00000143369.15			1104	2.046	0.3236	Yes
30	SNED1	ENSG00000162804.14			1129	2.032	0.3311	Yes
31	SPON2	ENSG00000159674.12			1174	2.003	0.3380	Yes
32	IGFBP6	ENSG00000167779.9			1241	1.971	0.3442	Yes
33	LAMB4	ENSG00000091128.13			1267	1.956	0.3514	Yes
34	MFAP2	ENSG00000117122.14			1290	1.945	0.3586	Yes
35	NTNG1	ENSG00000162631.18			1308	1.933	0.3658	Yes
36	THBS2	ENSG00000186340.15			1447	1.867	0.3700	Yes
37	LTBP4	ENSG00000090006.17			1533	1.830	0.3752	Yes
38	MATN1	ENSG00000162510.6			1553	1.817	0.3820	Yes
39	IGFBP3	ENSG00000146674.15			1828	1.702	0.3823	Yes
40	NDNF	ENSG00000173376.14			1863	1.685	0.3882	Yes
41	TSKU	ENSG00000182704.8			1939	1.654	0.3930	Yes
42	IGFBP5	ENSG00000115461.5			1987	1.637	0.3984	Yes
43	LAMA1	ENSG00000101680.15			2061	1.609	0.4030	Yes
44	SPON1	ENSG00000262655.4			2107	1.596	0.4083	Yes
45	RSPO3	ENSG00000146374.14			2124	1.591	0.4142	Yes
46	CCN5	ENSG00000064205.10			2260	1.545	0.4172	Yes
47	GAS6	ENSG00000183087.15			2269	1.542	0.4231	Yes
48	MXRA5	ENSG00000101825.8			2436	1.494	0.4251	Yes
49	IGFBP2	ENSG00000115457.10			2774	1.385	0.4228	Yes
50	CCN4	ENSG00000104415.14			2781	1.383	0.4281	Yes
51	EFEMP2	ENSG00000172638.13			2973	1.339	0.4289	Yes
52	ECM2	ENSG00000106823.12			3170	1.296	0.4295	Yes
53	LTBP1	ENSG00000049323.16			3213	1.284	0.4336	Yes
54	NTN3	ENSG00000162068.2			3239	1.278	0.4381	Yes
55	MATN4	ENSG00000124159.15			3329	1.259	0.4410	Yes
56	VWF	ENSG00000110799.13			3693	1.186	0.4372	Yes
57	MGP	ENSG00000111341.10			3725	1.178	0.4412	Yes
58	GLDN	ENSG00000186417.14			3816	1.162	0.4437	Yes
59	FBLN7	ENSG00000144152.13			3897	1.146	0.4463	Yes
60	VWA2	ENSG00000165816.13			3906	1.145	0.4507	Yes
61	SMOC2	ENSG00000112562.18			3944	1.138	0.4543	Yes
62	THBS1	ENSG00000137801.11			4127	1.107	0.4544	Yes
63	IGSF10	ENSG00000152580.8			4244	1.084	0.4560	Yes
64	KCP	ENSG00000135253.13			4307	1.075	0.4588	Yes
65	TNC	ENSG00000041982.16			4396	1.062	0.4610	Yes
66	NELL2	ENSG00000184613.10			4492	1.045	0.4629	Yes
67	NTN5	ENSG00000142233.11			4679	1.017	0.4626	Yes
68	LGI2	ENSG00000153012.12			4730	1.009	0.4654	Yes
69	VWA3A	ENSG00000175267.15			4988	0.970	0.4633	No
70	VWA7	ENSG00000204396.11			5110	0.953	0.4642	No
71	LGI1	ENSG00000108231.13			5517	0.899	0.4583	No
72	EFEMP1	ENSG00000115380.20			5601	0.888	0.4599	No
73	MMRN2	ENSG00000173269.14			5672	0.880	0.4617	No
74	FBN1	ENSG00000166147.13			5850	0.858	0.4610	No
75	COMP	ENSG00000105664.11			6225	0.814	0.4555	No
76	THBS3	ENSG00000169231.13			6284	0.808	0.4574	No
77	THSD4	ENSG00000187720.14			6296	0.807	0.4603	No
78	IGFALS	ENSG00000099769.5			6320	0.805	0.4629	No
79	VTN	ENSG00000109072.14			7359	0.704	0.4416	No
80	FNDC8	ENSG00000073598.6			7366	0.704	0.4442	No
81	THBS4	ENSG00000113296.14			7404	0.700	0.4461	No
82	LAMC3	ENSG00000050555.18			8105	0.637	0.4323	No
83	RELN	ENSG00000189056.14			8324	0.618	0.4297	No
84	RSPO2	ENSG00000147655.12			9109	0.562	0.4136	No
85	EMILIN3	ENSG00000183798.5			9386	0.545	0.4094	No
86	FGA	ENSG00000171560.16			9683	0.524	0.4046	No
87	MFGE8	ENSG00000140545.15			9817	0.521	0.4035	No
88	FN1	ENSG00000115414.19			9913	0.516	0.4033	No
89	LAMB2	ENSG00000172037.14			9976	0.514	0.4039	No
90	CRISPLD1	ENSG00000121005.9			10130	0.502	0.4023	No
91	PAPLN	ENSG00000100767.16			10307	0.491	0.4002	No
92	EYS	ENSG00000188107.15			10470	0.480	0.3983	No
93	CILP	ENSG00000138615.6			10643	0.469	0.3962	No
94	CILP2	ENSG00000160161.9			11030	0.442	0.3889	No
95	FBN2	ENSG00000138829.12			11219	0.432	0.3862	No
96	INTS14	ENSG00000138614.15			11455	0.416	0.3824	No
97	CCN6	ENSG00000112761.20			11461	0.416	0.3839	No
98	ZP3	ENSG00000188372.15			12028	0.387	0.3723	No
99	FNDC7	ENSG00000143107.10			12130	0.381	0.3714	No
100	ZP1	ENSG00000149506.11			12316	0.374	0.3686	No
101	ADIPOQ	ENSG00000181092.10			12514	0.365	0.3655	No
102	ZP2	ENSG00000103310.10			12868	0.355	0.3587	No
103	LTBP3	ENSG00000168056.16			13216	0.345	0.3519	No
104	FGL2	ENSG00000127951.7			14791	0.292	0.3164	No
105	DMP1	ENSG00000152592.14			14902	0.287	0.3150	No
106	SPARCL1	ENSG00000152583.12			15335	0.283	0.3061	No
107	SSPO	ENSG00000197558.12			15851	0.257	0.2951	No
108	PXDNL	ENSG00000147485.13			16046	0.246	0.2915	No
109	ANOS1	ENSG00000011201.12			16273	0.231	0.2872	No
110	AMELX	ENSG00000125363.14			16753	0.208	0.2768	No
111	EMID1	ENSG00000186998.16			17267	0.185	0.2656	No
112	INTS6L	ENSG00000165359.15			18138	0.139	0.2459	No
113	SLIT1	ENSG00000187122.17			18654	0.116	0.2344	No
114	RSPO4	ENSG00000101282.9			18734	0.111	0.2330	No
115	LGI3	ENSG00000168481.9			19647	0.064	0.2120	No
116	CRISPLD2	ENSG00000103196.12			19779	0.057	0.2092	No
117	LGI4	ENSG00000153902.14			20108	0.042	0.2017	No
118	SPP1	ENSG00000118785.14			20575	0.018	0.1909	No
119	CCN1	ENSG00000142871.17			22390	-0.079	0.1490	No
120	LAMC1	ENSG00000135862.6			22432	-0.081	0.1483	No
121	LAMA2	ENSG00000196569.12			22603	-0.091	0.1447	No
122	FGG	ENSG00000171557.17			22680	-0.095	0.1433	No
123	FNDC1	ENSG00000164694.17			23291	-0.129	0.1296	No
124	MEPE	ENSG00000152595.16			25833	-0.250	0.0714	No
125	AGRN	ENSG00000188157.15			25926	-0.255	0.0703	No
126	TSPEAR	ENSG00000175894.18			26499	-0.266	0.0580	No
127	MMRN1	ENSG00000138722.10			26727	-0.275	0.0538	No
128	OTOL1	ENSG00000182447.4			26871	-0.275	0.0516	No
129	CRIM1	ENSG00000150938.10			27020	-0.275	0.0492	No
130	VWA5B2	ENSG00000145198.14			27302	-0.295	0.0438	No
131	AMBN	ENSG00000178522.14			27454	-0.297	0.0415	No
132	VWA3B	ENSG00000168658.19			27943	-0.305	0.0313	No
133	DSPP	ENSG00000152591.15			28022	-0.311	0.0308	No
134	PXDN	ENSG00000130508.11			29709	-0.387	-0.0070	No
135	TINAGL1	ENSG00000142910.16			29866	-0.395	-0.0091	No
136	TNR	ENSG00000116147.17			29931	-0.401	-0.0090	No
137	VWA1	ENSG00000179403.12			29936	-0.402	-0.0075	No
138	SBSPON	ENSG00000164764.11			29941	-0.402	-0.0060	No
139	NTNG2	ENSG00000196358.11			30172	-0.419	-0.0097	No
140	POMZP3	ENSG00000146707.14			30425	-0.433	-0.0138	No
141	COCH	ENSG00000100473.18			31549	-0.493	-0.0380	No
142	LTBP2	ENSG00000119681.12			31926	-0.510	-0.0448	No
143	CCN2	ENSG00000118523.6			32823	-0.570	-0.0634	No
144	LAMA3	ENSG00000053747.16			32988	-0.582	-0.0649	No
145	POSTN	ENSG00000133110.15			33395	-0.612	-0.0719	No
146	EDIL3	ENSG00000164176.13			33729	-0.640	-0.0772	No
147	VWA5B1	ENSG00000158816.15			33860	-0.650	-0.0776	No
148	FBN3	ENSG00000142449.13			34259	-0.679	-0.0842	No
149	VWDE	ENSG00000146530.14			34944	-0.738	-0.0972	No
150	USH2A	ENSG00000042781.13			35129	-0.754	-0.0985	No
151	ABI3BP	ENSG00000154175.17			35307	-0.769	-0.0996	No
152	MFAP1	ENSG00000140259.7			36107	-0.857	-0.1148	No
153	CRELD2	ENSG00000184164.14			36510	-0.902	-0.1206	No
154	ELN	ENSG00000049540.17			37004	-0.966	-0.1283	No
155	SPARC	ENSG00000113140.11			37052	-0.974	-0.1255	No
156	NID2	ENSG00000087303.18			37054	-0.975	-0.1217	No
157	FRAS1	ENSG00000138759.19			37156	-0.987	-0.1202	No
158	TNFAIP6	ENSG00000123610.5			37407	-1.021	-0.1219	No
159	LAMC2	ENSG00000058085.15			37414	-1.022	-0.1180	No
160	SMOC1	ENSG00000198732.10			37952	-1.109	-0.1262	No
161	COLQ	ENSG00000206561.13			38666	-1.236	-0.1379	No
162	MFAP5	ENSG00000197614.11			38668	-1.237	-0.1330	No
163	BGLAP	ENSG00000242252.2			38699	-1.243	-0.1288	No
164	IBSP	ENSG00000029559.7			38893	-1.288	-0.1282	No
165	TECTB	ENSG00000119913.6			38943	-1.297	-0.1242	No
166	NELL1	ENSG00000165973.19			39509	-1.424	-0.1318	No
167	OIT3	ENSG00000138315.13			39527	-1.426	-0.1265	No
168	IGFBP7	ENSG00000163453.11			39937	-1.531	-0.1300	No
169	SRPX2	ENSG00000102359.7			39993	-1.546	-0.1251	No
170	MATN3	ENSG00000132031.13			40083	-1.566	-0.1210	No
171	LAMB3	ENSG00000196878.15			40157	-1.589	-0.1164	No
172	IGFBP1	ENSG00000146678.10			40197	-1.599	-0.1110	No
173	HMCN2	ENSG00000148357.16			40680	-1.743	-0.1154	No
174	TGFBI	ENSG00000120708.17			40715	-1.752	-0.1092	No
175	NTN4	ENSG00000074527.12			40972	-1.850	-0.1079	No
176	CRELD1	ENSG00000163703.17			40973	-1.851	-0.1005	No
177	MFAP3	ENSG00000037749.12			41206	-1.961	-0.0982	No
178	TECTA	ENSG00000109927.10			41250	-1.977	-0.0914	No
179	VWA5A	ENSG00000110002.16			41384	-2.054	-0.0864	No
180	TNN	ENSG00000120332.16			41639	-2.216	-0.0835	No
181	ZPLD1	ENSG00000170044.8			41688	-2.241	-0.0758	No
182	TINAG	ENSG00000137251.16			41783	-2.314	-0.0688	No
183	LRG1	ENSG00000171236.10			42146	-2.634	-0.0668	No
184	DMBT1	ENSG00000187908.19			42199	-2.691	-0.0574	No
185	LAMA5	ENSG00000130702.15			42431	-3.030	-0.0508	No
186	NPNT	ENSG00000168743.12			42684	-3.542	-0.0426	No
187	EGFLAM	ENSG00000164318.18			42765	-3.770	-0.0296	No
188	OTOG	ENSG00000188162.11			43012	-4.761	-0.0165	No
189	IGFBPL1	ENSG00000137142.5			43020	-4.797	0.0023	No

Fig 2: NABA_ECM_GLYCOPROTEINS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: NABA_ECM_GLYCOPROTEINS: Random ES distribution   
Gene set null distribution of ES for NABA_ECM_GLYCOPROTEINS