DatasetNormalized.Phenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
PhenotypePhenotype.FSHD2.FSHD2M.cls#FSHD2_versus_FSHD2M
Upregulated in classFSHD2M
GeneSetREACTOME_HIV_INFECTION
Enrichment Score (ES)-0.4909854
Normalized Enrichment Score (NES)-1.9907914
Nominal p-value0.0
FDR q-value0.0011772191
FWER p-Value0.048
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_HIV_INFECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VPS37DENSG00000176428.64732.6430.0025No
2PSMB9ENSG00000240065.86532.4090.0106No
3APOBEC3GENSG00000239713.98762.1860.0165No
4B2MENSG00000166710.209232.1520.0264No
5PSMB8ENSG00000204264.1110232.0950.0348No
6HMGA1ENSG00000137309.1913461.9080.0371No
7AP1S1ENSG00000106367.1518031.7160.0352No
8PSMB10ENSG00000205220.1230861.3130.0120No
9NUP50ENSG00000093000.1945501.036-0.0168No
10VPS4BENSG00000119541.1046531.022-0.0140No
11AP1S2ENSG00000182287.1547151.011-0.0103No
12AP2B1ENSG00000006125.1851630.946-0.0159No
13PACS1ENSG00000175115.1259810.843-0.0306No
14AP2A2ENSG00000183020.1362930.807-0.0338No
15NUP54ENSG00000138750.1565660.781-0.0361No
16POLR2KENSG00000147669.1166810.769-0.0348No
17MVB12AENSG00000141971.1366960.768-0.0313No
18CHMP3ENSG00000115561.1668600.751-0.0312No
19DOCK2ENSG00000134516.1770560.733-0.0320No
20GTF2H1ENSG00000110768.1275130.689-0.0391No
21ELLENSG00000105656.1378870.656-0.0445No
22MVB12BENSG00000196814.1580160.646-0.0442No
23PSIP1ENSG00000164985.1584640.608-0.0515No
24HCKENSG00000101336.1492380.552-0.0667No
25UBA52ENSG00000221983.899870.512-0.0815No
26CDK9ENSG00000136807.14100900.504-0.0813No
27CHMP4CENSG00000164695.5104660.481-0.0876No
28CHMP4AENSG00000254505.10104960.479-0.0859No
29HLA-AENSG00000206503.13106120.470-0.0862No
30AP2A1ENSG00000196961.12112820.428-0.0996No
31POLR2HENSG00000163882.9122050.377-0.1191No
32GTF2H5ENSG00000272047.2123910.370-0.1216No
33TCEA1ENSG00000187735.14131640.348-0.1378No
34PPIAENSG00000196262.14134370.331-0.1424No
35NELFCDENSG00000101158.15145420.308-0.1666No
36NELFBENSG00000188986.7145780.305-0.1659No
37LCKENSG00000182866.17154960.275-0.1858No
38ELOBENSG00000103363.14158890.254-0.1937No
39NMT1ENSG00000136448.12160030.249-0.1951No
40PSMA2ENSG00000106588.11164180.224-0.2036No
41POLR2LENSG00000177700.6164730.221-0.2037No
42POLR2EENSG00000099817.12167420.208-0.2089No
43CD8BENSG00000172116.23168080.206-0.2093No
44RAC1ENSG00000136238.18168860.203-0.2101No
45SUPT4H1ENSG00000213246.7170670.194-0.2133No
46UBBENSG00000170315.14171760.189-0.2149No
47GTF2BENSG00000137947.12172840.184-0.2164No
48GTF2E2ENSG00000197265.9173770.179-0.2177No
49VPS4AENSG00000132612.16174360.176-0.2181No
50PSME1ENSG00000092010.15177440.161-0.2244No
51TAF6ENSG00000106290.15180640.143-0.2312No
52ELMO1ENSG00000155849.15182880.131-0.2357No
53TAF12ENSG00000120656.11185000.125-0.2400No
54GTF2H4ENSG00000213780.11186250.117-0.2423No
55CTDP1ENSG00000060069.16186470.116-0.2422No
56AP2S1ENSG00000042753.11188910.104-0.2473No
57RCC1ENSG00000180198.16203050.031-0.2801No
58PSMF1ENSG00000125818.18205600.019-0.2859No
59NELFAENSG00000185049.16207020.012-0.2891No
60CHMP2AENSG00000130724.9208160.006-0.2917No
61VPS28ENSG00000160948.14208430.005-0.2923No
62TAF5ENSG00000148835.11208830.003-0.2932No
63SEM1ENSG00000127922.921274-0.020-0.3022No
64CDK7ENSG00000134058.1221543-0.034-0.3083No
65ELOA2ENSG00000206181.521573-0.036-0.3088No
66SEC13ENSG00000157020.1821577-0.036-0.3087No
67CCNKENSG00000090061.1721883-0.050-0.3155No
68UBCENSG00000150991.1521944-0.054-0.3166No
69CHMP2BENSG00000083937.922106-0.063-0.3201No
70CD4ENSG00000010610.1022265-0.072-0.3234No
71PDCD6IPENSG00000170248.1522499-0.084-0.3284No
72ARF1ENSG00000143761.1622558-0.088-0.3293No
73CCNHENSG00000134480.1522740-0.098-0.3330No
74TBPENSG00000112592.1422837-0.104-0.3347No
75FYNENSG00000010810.1722887-0.107-0.3353No
76NPM1ENSG00000181163.1322984-0.111-0.3370No
77VPS37AENSG00000155975.1023002-0.112-0.3368No
78PSMD9ENSG00000110801.1423060-0.115-0.3376No
79NMT2ENSG00000152465.1823501-0.141-0.3471No
80TAF4ENSG00000130699.1823572-0.145-0.3480No
81AP1M1ENSG00000072958.823653-0.149-0.3491No
82BTRCENSG00000166167.1823772-0.155-0.3511No
83POLR2JENSG00000005075.1523836-0.160-0.3517No
84PSMD5ENSG00000095261.1423841-0.161-0.3510No
85GTF2A1ENSG00000165417.1224077-0.176-0.3556No
86RPS27AENSG00000143947.1324249-0.185-0.3586No
87TAF1ENSG00000147133.1524787-0.218-0.3700No
88NUP98ENSG00000110713.1724843-0.220-0.3702No
89TAF7LENSG00000102387.1525549-0.230-0.3854No
90POLR2CENSG00000102978.1325751-0.243-0.3889No
91RNMTENSG00000101654.1725839-0.250-0.3896No
92GTF2H2ENSG00000145736.1425992-0.260-0.3918No
93POLR2IENSG00000105258.926035-0.262-0.3915No
94PSMA8ENSG00000154611.1426134-0.263-0.3924No
95AAASENSG00000094914.1426543-0.269-0.4006No
96POLR2FENSG00000100142.1527064-0.278-0.4113No
97TPRENSG00000047410.1427549-0.301-0.4210No
98PSMB11ENSG00000222028.527828-0.302-0.4260No
99ERCC3ENSG00000163161.1328052-0.314-0.4296No
100TAF10ENSG00000166337.1028088-0.316-0.4288No
101CD247ENSG00000198821.1028109-0.318-0.4276No
102AP2M1ENSG00000161203.1328129-0.319-0.4264No
103CHMP6ENSG00000176108.928428-0.333-0.4317No
104AP1S3ENSG00000152056.1728567-0.340-0.4332No
105LIG1ENSG00000105486.1429118-0.354-0.4442No
106PSMB3ENSG00000277791.529269-0.361-0.4458No
107POM121CENSG00000272391.630109-0.414-0.4633No
108PSMA1ENSG00000129084.1730662-0.448-0.4739No
109TAF4BENSG00000141384.1230726-0.448-0.4731No
110PSME3ENSG00000131467.1130737-0.449-0.4710No
111GTF2F1ENSG00000125651.1430762-0.451-0.4693No
112RAE1ENSG00000101146.1330841-0.456-0.4688No
113POM121ENSG00000196313.1131048-0.463-0.4712No
114TAF1LENSG00000122728.631097-0.467-0.4699No
115UBAP1ENSG00000165006.1431108-0.468-0.4678No
116VPS37CENSG00000167987.1131117-0.469-0.4656No
117NUP37ENSG00000075188.931852-0.505-0.4801No
118PSMA3ENSG00000100567.1331911-0.509-0.4789No
119CHMP7ENSG00000147457.1432432-0.541-0.4882Yes
120CHMP4BENSG00000101421.432454-0.542-0.4860Yes
121NUP133ENSG00000069248.1232517-0.544-0.4846Yes
122NUP205ENSG00000155561.1532543-0.546-0.4824Yes
123RANBP1ENSG00000099901.1732652-0.556-0.4821Yes
124SUPT16HENSG00000092201.1032713-0.561-0.4806Yes
125NELFEENSG00000204356.1432806-0.569-0.4799Yes
126SSRP1ENSG00000149136.933026-0.585-0.4820Yes
127PSMB1ENSG00000008018.933034-0.586-0.4792Yes
128ATP6V1HENSG00000047249.1833094-0.590-0.4775Yes
129NUP85ENSG00000125450.1133137-0.593-0.4755Yes
130RBX1ENSG00000100387.933259-0.602-0.4752Yes
131RANGAP1ENSG00000100401.1933269-0.602-0.4724Yes
132TAF2ENSG00000064313.1233423-0.615-0.4728Yes
133PSMD13ENSG00000185627.1833437-0.616-0.4700Yes
134PSMB4ENSG00000159377.1133581-0.627-0.4701Yes
135PSME2ENSG00000100911.1633632-0.632-0.4681Yes
136TAF9ENSG00000273841.533655-0.635-0.4653Yes
137SEH1LENSG00000085415.1633694-0.638-0.4630Yes
138KPNB1ENSG00000108424.1033836-0.648-0.4629Yes
139PSMD10ENSG00000101843.1933841-0.648-0.4597Yes
140CXCR4ENSG00000121966.634272-0.681-0.4663Yes
141PAK2ENSG00000180370.1034479-0.701-0.4675Yes
142NUP35ENSG00000163002.1334581-0.709-0.4663Yes
143NUP62ENSG00000213024.1135039-0.744-0.4731Yes
144CHMP5ENSG00000086065.1435071-0.748-0.4700Yes
145TAF3ENSG00000165632.835310-0.769-0.4716Yes
146PSMC5ENSG00000087191.1335455-0.783-0.4710Yes
147GTF2H3ENSG00000111358.1435650-0.804-0.4714Yes
148NUP43ENSG00000120253.1435668-0.806-0.4677Yes
149PSMA7ENSG00000101182.1535709-0.810-0.4645Yes
150PSMB2ENSG00000126067.1235837-0.822-0.4633Yes
151NUP214ENSG00000126883.1735916-0.833-0.4609Yes
152NUP160ENSG00000030066.1335953-0.838-0.4574Yes
153NCBP2ENSG00000114503.1136040-0.848-0.4551Yes
154BANF1ENSG00000175334.836126-0.859-0.4527Yes
155PSMA5ENSG00000143106.1336170-0.865-0.4493Yes
156PSMC2ENSG00000161057.1236487-0.899-0.4521Yes
157NUP153ENSG00000124789.1136546-0.906-0.4488Yes
158NUP188ENSG00000095319.1436744-0.935-0.4486Yes
159PSMB7ENSG00000136930.1336803-0.941-0.4452Yes
160XRCC6ENSG00000196419.1236832-0.946-0.4410Yes
161CCNT1ENSG00000129315.1136877-0.950-0.4372Yes
162SKP1ENSG00000113558.1836892-0.952-0.4327Yes
163KPNA1ENSG00000114030.1336942-0.958-0.4289Yes
164PSMB6ENSG00000142507.1037064-0.976-0.4268Yes
165CCNT2ENSG00000082258.1337271-1.002-0.4264Yes
166AP1B1ENSG00000100280.1637284-1.004-0.4216Yes
167AP1G1ENSG00000166747.1237396-1.019-0.4190Yes
168FURINENSG00000140564.1237563-1.044-0.4175Yes
169NUP107ENSG00000111581.1037710-1.069-0.4155Yes
170XPO1ENSG00000082898.1737727-1.072-0.4104Yes
171POLR2GENSG00000168002.1237749-1.077-0.4054Yes
172SLC25A5ENSG00000005022.637760-1.078-0.4001Yes
173GTF2A2ENSG00000140307.1137772-1.079-0.3949Yes
174ELOAENSG00000011007.1237965-1.112-0.3937Yes
175SUPT5HENSG00000196235.1438036-1.123-0.3896Yes
176PSMA4ENSG00000041357.1638333-1.177-0.3905Yes
177FEN1ENSG00000168496.438431-1.194-0.3867Yes
178PSMB5ENSG00000100804.1938565-1.217-0.3835Yes
179TSG101ENSG00000074319.1338589-1.221-0.3779Yes
180TAF7ENSG00000178913.838592-1.222-0.3717Yes
181PSMD7ENSG00000103035.1138868-1.282-0.3715Yes
182LIG4ENSG00000174405.1339026-1.316-0.3685Yes
183ELOCENSG00000154582.1639129-1.337-0.3640Yes
184POLR2BENSG00000047315.1639275-1.369-0.3604Yes
185PSMD6ENSG00000163636.1039440-1.407-0.3571Yes
186TAF15ENSG00000270647.639488-1.420-0.3509Yes
187NUP88ENSG00000108559.1239539-1.429-0.3448Yes
188CUL5ENSG00000166266.1439600-1.441-0.3389Yes
189PSMA6ENSG00000100902.1139610-1.444-0.3317Yes
190PSMD3ENSG00000108344.1539660-1.456-0.3254Yes
191NDC1ENSG00000058804.1239702-1.467-0.3189Yes
192PSMD4ENSG00000159352.1539708-1.468-0.3115Yes
193TAF9BENSG00000187325.539739-1.475-0.3047Yes
194PSMC1ENSG00000100764.1439751-1.479-0.2974Yes
195RANBP2ENSG00000153201.1639878-1.517-0.2926Yes
196RANENSG00000132341.1239982-1.544-0.2871Yes
197GTF2F2ENSG00000188342.1240005-1.549-0.2797Yes
198POLR2AENSG00000181222.1640044-1.559-0.2727Yes
199TAF13ENSG00000197780.1040119-1.578-0.2663Yes
200NUP210ENSG00000132182.1240138-1.584-0.2587Yes
201PSMD12ENSG00000197170.1040160-1.590-0.2511Yes
202PSMD8ENSG00000099341.1140314-1.631-0.2463Yes
203XRCC5ENSG00000079246.1640327-1.635-0.2383Yes
204POLR2DENSG00000144231.1140398-1.657-0.2314Yes
205PSMC4ENSG00000013275.840405-1.659-0.2231Yes
206NUP155ENSG00000113569.1640500-1.687-0.2167Yes
207RNGTTENSG00000111880.1640533-1.697-0.2088Yes
208PSMD11ENSG00000108671.1140619-1.724-0.2020Yes
209VTA1ENSG00000009844.1640695-1.747-0.1948Yes
210PSMD14ENSG00000115233.1240751-1.767-0.1871Yes
211PSMC6ENSG00000100519.1240791-1.783-0.1789Yes
212AP1M2ENSG00000129354.1140801-1.786-0.1700Yes
213GTF2E1ENSG00000153767.1040925-1.833-0.1635Yes
214CCR5ENSG00000160791.1341133-1.925-0.1585Yes
215PSMD1ENSG00000173692.1341284-1.994-0.1518Yes
216TAF11ENSG00000064995.1841303-2.008-0.1420Yes
217NCBP1ENSG00000136937.1341449-2.100-0.1347Yes
218PSMC3ENSG00000165916.841467-2.112-0.1243Yes
219MNAT1ENSG00000020426.1141558-2.168-0.1153Yes
220ERCC2ENSG00000104884.1541619-2.203-0.1055Yes
221VPS37BENSG00000139722.741722-2.271-0.0963Yes
222PSME4ENSG00000068878.1541799-2.328-0.0862Yes
223NUP58ENSG00000139496.1641803-2.330-0.0744Yes
224PSMD2ENSG00000175166.1741820-2.343-0.0628Yes
225NEDD4LENSG00000049759.1842475-3.096-0.0623Yes
226NUP93ENSG00000102900.1342500-3.124-0.0469Yes
227SLC25A4ENSG00000151729.1142557-3.224-0.0317Yes
228XRCC4ENSG00000152422.1542833-4.034-0.0176Yes
229CD28ENSG00000178562.1843006-4.7480.0026Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_HIV_INFECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_HIV_INFECTION: Random ES distribution   
Gene set null distribution of ES for REACTOME_HIV_INFECTION