Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Normalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH |
| Phenotype | Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH |
| Upregulated in class | FSHD2 |
| GeneSet | HALLMARK_ANGIOGENESIS |
| Enrichment Score (ES) | 0.4282448 |
| Normalized Enrichment Score (NES) | 1.5507758 |
| Nominal p-value | 0.02446982 |
| FDR q-value | 0.067717806 |
| FWER p-Value | 0.204 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | LPL | ENSG00000175445.17 | 194 | 1.247 | 0.0765 | Yes | ||
| 2 | STC1 | ENSG00000159167.12 | 211 | 1.227 | 0.1560 | Yes | ||
| 3 | TIMP1 | ENSG00000102265.12 | 352 | 1.090 | 0.2235 | Yes | ||
| 4 | PRG2 | ENSG00000186652.10 | 1606 | 0.758 | 0.2424 | Yes | ||
| 5 | SERPINA5 | ENSG00000188488.14 | 1979 | 0.708 | 0.2794 | Yes | ||
| 6 | FGFR1 | ENSG00000077782.20 | 2810 | 0.622 | 0.2997 | Yes | ||
| 7 | CXCL6 | ENSG00000124875.10 | 2918 | 0.612 | 0.3369 | Yes | ||
| 8 | LUM | ENSG00000139329.5 | 3247 | 0.588 | 0.3672 | Yes | ||
| 9 | JAG2 | ENSG00000184916.9 | 4118 | 0.536 | 0.3810 | Yes | ||
| 10 | PGLYRP1 | ENSG00000008438.5 | 4818 | 0.503 | 0.3967 | Yes | ||
| 11 | CCND2 | ENSG00000118971.8 | 4862 | 0.500 | 0.4282 | Yes | ||
| 12 | TNFRSF21 | ENSG00000146072.6 | 12662 | 0.249 | 0.2548 | No | ||
| 13 | PF4 | ENSG00000163737.4 | 12734 | 0.247 | 0.2692 | No | ||
| 14 | VTN | ENSG00000109072.14 | 13279 | 0.229 | 0.2709 | No | ||
| 15 | LRPAP1 | ENSG00000163956.13 | 14640 | 0.186 | 0.2499 | No | ||
| 16 | SLCO2A1 | ENSG00000174640.14 | 14972 | 0.175 | 0.2532 | No | ||
| 17 | MSX1 | ENSG00000163132.8 | 14975 | 0.174 | 0.2645 | No | ||
| 18 | VEGFA | ENSG00000112715.22 | 15227 | 0.167 | 0.2693 | No | ||
| 19 | VCAN | ENSG00000038427.16 | 20990 | 0.012 | 0.1300 | No | ||
| 20 | JAG1 | ENSG00000101384.12 | 21019 | 0.012 | 0.1300 | No | ||
| 21 | KCNJ8 | ENSG00000121361.5 | 21567 | -0.003 | 0.1169 | No | ||
| 22 | THBD | ENSG00000178726.6 | 22330 | -0.022 | 0.0998 | No | ||
| 23 | PTK2 | ENSG00000169398.19 | 23810 | -0.061 | 0.0678 | No | ||
| 24 | COL3A1 | ENSG00000168542.14 | 24737 | -0.084 | 0.0507 | No | ||
| 25 | VAV2 | ENSG00000160293.17 | 26522 | -0.136 | 0.0162 | No | ||
| 26 | PDGFA | ENSG00000197461.13 | 27805 | -0.174 | -0.0036 | No | ||
| 27 | APP | ENSG00000142192.21 | 29094 | -0.215 | -0.0210 | No | ||
| 28 | COL5A2 | ENSG00000204262.14 | 32186 | -0.304 | -0.0764 | No | ||
| 29 | APOH | ENSG00000091583.11 | 32337 | -0.311 | -0.0598 | No | ||
| 30 | FSTL1 | ENSG00000163430.12 | 35057 | -0.368 | -0.1020 | No | ||
| 31 | POSTN | ENSG00000133110.15 | 36812 | -0.441 | -0.1159 | No | ||
| 32 | ITGAV | ENSG00000138448.12 | 37784 | -0.511 | -0.1063 | No | ||
| 33 | SPP1 | ENSG00000118785.14 | 38686 | -0.569 | -0.0911 | No | ||
| 34 | OLR1 | ENSG00000173391.9 | 39260 | -0.619 | -0.0648 | No | ||
| 35 | S100A4 | ENSG00000196154.12 | 40530 | -0.850 | -0.0403 | No | ||
| 36 | NRP1 | ENSG00000099250.18 | 40541 | -0.854 | 0.0151 | No |
