DatasetNormalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
PhenotypePhenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in classARH
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)-0.59961104
Normalized Enrichment Score (NES)-3.217025
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1WDR90ENSG00000161996.1926330.640-0.0553No
2CDKN1BENSG00000111276.1143800.521-0.0907No
3LBRENSG00000143815.1575150.370-0.1620No
4PAN2ENSG00000135473.1589250.339-0.1917No
5SHMT1ENSG00000176974.2089770.337-0.1882No
6EXOSC8ENSG00000120699.1393750.320-0.1935No
7LUC7L3ENSG00000108848.16123420.259-0.2622No
8NASPENSG00000132780.17133290.227-0.2831No
9CHEK2ENSG00000183765.22145220.190-0.3096No
10PNNENSG00000100941.9149660.175-0.3180No
11POLE4ENSG00000115350.12153680.163-0.3255No
12CDC25BENSG00000101224.17156290.156-0.3297No
13PDS5BENSG00000083642.19161910.140-0.3414No
14RPA2ENSG00000117748.10169450.118-0.3581No
15RAD1ENSG00000113456.19170500.116-0.3590No
16MCM7ENSG00000166508.17174950.104-0.3684No
17ASF1AENSG00000111875.8178730.094-0.3763No
18EEDENSG00000074266.21180110.090-0.3784No
19HMGA1ENSG00000137309.19180180.090-0.3773No
20SSRP1ENSG00000149136.9181910.086-0.3803No
21PHF5AENSG00000100410.8186180.076-0.3896No
22RAD21ENSG00000164754.14187300.073-0.3913No
23POLEENSG00000177084.17194030.054-0.4070No
24ORC2ENSG00000115942.9196070.048-0.4113No
25MRE11ENSG00000020922.12198960.041-0.4177No
26SNRPBENSG00000125835.18200500.038-0.4209No
27NOLC1ENSG00000166197.16204930.025-0.4314No
28CDKN1AENSG00000124762.13212970.004-0.4509No
29SMC4ENSG00000113810.1621685-0.006-0.4603No
30NBNENSG00000104320.1321733-0.007-0.4613No
31TBRG4ENSG00000136270.1421759-0.008-0.4618No
32NAP1L1ENSG00000187109.1422158-0.017-0.4713No
33CTCFENSG00000102974.1622185-0.018-0.4717No
34RAD50ENSG00000113522.1422224-0.019-0.4724No
35HNRNPDENSG00000138668.1922348-0.022-0.4751No
36TRA2BENSG00000136527.1822499-0.027-0.4784No
37POP7ENSG00000172336.522583-0.028-0.4800No
38MSH2ENSG00000095002.1422645-0.030-0.4811No
39AK2ENSG00000004455.1722999-0.039-0.4891No
40PPM1DENSG00000170836.1123026-0.040-0.4892No
41CITENSG00000122966.1623230-0.045-0.4935No
42NAA38ENSG00000183011.1323374-0.049-0.4963No
43HMGB2ENSG00000164104.1223415-0.050-0.4966No
44DSCC1ENSG00000136982.623467-0.051-0.4971No
45NUDT21ENSG00000167005.1424528-0.078-0.5219No
46NCAPD2ENSG00000010292.1324848-0.087-0.5285No
47POLA2ENSG00000014138.924862-0.087-0.5276No
48MTHFD2ENSG00000065911.1225466-0.104-0.5409No
49RBBP7ENSG00000102054.1725519-0.106-0.5406No
50DDX39AENSG00000123136.1525570-0.107-0.5404No
51POLD1ENSG00000062822.1425827-0.115-0.5450No
52PPP1R8ENSG00000117751.1825945-0.119-0.5462No
53ILF3ENSG00000129351.1726047-0.122-0.5470No
54PSIP1ENSG00000164985.1526088-0.123-0.5462No
55RFC1ENSG00000035928.1626169-0.125-0.5464No
56POLD3ENSG00000077514.926261-0.128-0.5469No
57CDK4ENSG00000135446.1726296-0.129-0.5459No
58UBR7ENSG00000012963.1526398-0.132-0.5465No
59XRCC6ENSG00000196419.1226529-0.136-0.5478No
60SMC6ENSG00000163029.1626572-0.137-0.5469No
61H2AFXENSG00000188486.326590-0.138-0.5454No
62RFC2ENSG00000049541.1126606-0.138-0.5438No
63UNGENSG00000076248.1026682-0.140-0.5437No
64NUP107ENSG00000111581.1026867-0.145-0.5462No
65DCTPP1ENSG00000179958.926881-0.146-0.5445No
66CNOT9ENSG00000144580.1327082-0.152-0.5472No
67TFRCENSG00000072274.1327176-0.154-0.5473No
68USP1ENSG00000162607.1327180-0.154-0.5452No
69TP53ENSG00000141510.1727245-0.156-0.5446No
70CBX5ENSG00000094916.1627290-0.158-0.5435No
71DUTENSG00000128951.1427355-0.160-0.5428No
72MXD3ENSG00000213347.1027476-0.163-0.5435No
73NOP56ENSG00000101361.1727506-0.165-0.5419No
74SUV39H1ENSG00000101945.1627901-0.176-0.5490No
75STAG1ENSG00000118007.1328245-0.188-0.5548No
76ING3ENSG00000071243.1628287-0.189-0.5531No
77LIG1ENSG00000105486.1428401-0.193-0.5532No
78MCM3ENSG00000112118.2029007-0.212-0.5650No
79SRSF2ENSG00000161547.1629115-0.215-0.5646No
80DONSONENSG00000159147.1829209-0.218-0.5639No
81NUP153ENSG00000124789.1129336-0.222-0.5638No
82EZH2ENSG00000106462.1029613-0.231-0.5673No
83POLD2ENSG00000106628.1029968-0.243-0.5726No
84CKS2ENSG00000123975.530183-0.250-0.5743No
85CKS1BENSG00000173207.1330473-0.259-0.5777No
86CDKN3ENSG00000100526.2030484-0.259-0.5744No
87RANBP1ENSG00000099901.1730689-0.265-0.5756No
88CDKN2CENSG00000123080.1230743-0.267-0.5732No
89PRKDCENSG00000253729.730793-0.269-0.5706No
90CDCA3ENSG00000111665.1130816-0.270-0.5674No
91ZW10ENSG00000086827.930856-0.271-0.5646No
92KIF22ENSG00000079616.1230925-0.274-0.5624No
93TIMELESSENSG00000111602.1231041-0.279-0.5613No
94RPA1ENSG00000132383.1231119-0.282-0.5592No
95PA2G4ENSG00000170515.1431890-0.293-0.5739No
96SYNCRIPENSG00000135316.1831926-0.294-0.5707No
97PTTG1ENSG00000164611.1331965-0.295-0.5675No
98MLH1ENSG00000076242.1432002-0.296-0.5642No
99CCNE1ENSG00000105173.1432197-0.305-0.5647No
100MCM2ENSG00000073111.1432546-0.318-0.5688No
101HMGB3ENSG00000029993.1532666-0.323-0.5672No
102TMPOENSG00000120802.1332905-0.332-0.5683No
103CDC20ENSG00000117399.1434187-0.349-0.5947Yes
104PSMC3IPENSG00000131470.1434196-0.349-0.5901Yes
105SRSF1ENSG00000136450.1334211-0.350-0.5855Yes
106HUS1ENSG00000136273.1334665-0.355-0.5916Yes
107MCM6ENSG00000076003.534728-0.357-0.5881Yes
108MMS22LENSG00000146263.1134820-0.362-0.5853Yes
109H2AFZENSG00000164032.1235129-0.370-0.5876Yes
110CDKN2AENSG00000147889.1735138-0.371-0.5827Yes
111TACC3ENSG00000013810.1935296-0.378-0.5812Yes
112E2F8ENSG00000129173.1335405-0.384-0.5785Yes
113BRMS1LENSG00000100916.1435432-0.385-0.5737Yes
114CCP110ENSG00000103540.1635632-0.395-0.5731Yes
115MCM5ENSG00000100297.1635805-0.402-0.5717Yes
116DNMT1ENSG00000130816.1636095-0.409-0.5730Yes
117CTPS1ENSG00000171793.1636239-0.413-0.5707Yes
118BIRC5ENSG00000089685.1536279-0.415-0.5659Yes
119ESPL1ENSG00000135476.1136287-0.415-0.5602Yes
120LYARENSG00000145220.1436304-0.416-0.5548Yes
121ANP32EENSG00000143401.1536344-0.418-0.5499Yes
122NUP205ENSG00000155561.1536490-0.426-0.5475Yes
123TK1ENSG00000167900.1236493-0.426-0.5416Yes
124RANENSG00000132341.1236507-0.427-0.5360Yes
125PMS2ENSG00000122512.1636521-0.428-0.5303Yes
126CCNB2ENSG00000157456.836613-0.432-0.5265Yes
127RPA3ENSG00000106399.1136661-0.434-0.5216Yes
128SPC24ENSG00000161888.1136669-0.434-0.5157Yes
129GINS3ENSG00000181938.1336693-0.435-0.5102Yes
130PLK1ENSG00000166851.1536707-0.436-0.5044Yes
131UBE2SENSG00000108106.1436803-0.440-0.5005Yes
132DCLRE1BENSG00000118655.736838-0.442-0.4952Yes
133KIF2CENSG00000142945.1336852-0.443-0.4893Yes
134KIF18BENSG00000186185.1436892-0.446-0.4841Yes
135SMC3ENSG00000108055.936921-0.447-0.4785Yes
136SPC25ENSG00000152253.937054-0.455-0.4753Yes
137PCNAENSG00000132646.1137166-0.461-0.4716Yes
138XPO1ENSG00000082898.1737227-0.465-0.4666Yes
139HMMRENSG00000072571.2037412-0.479-0.4644Yes
140AURKBENSG00000178999.1337485-0.484-0.4594Yes
141RFC3ENSG00000133119.1337532-0.487-0.4537Yes
142PRDX4ENSG00000123131.1337599-0.493-0.4484Yes
143KIF4AENSG00000090889.1237615-0.495-0.4419Yes
144DLGAP5ENSG00000126787.1337762-0.508-0.4383Yes
145MAD2L1ENSG00000164109.1437893-0.520-0.4342Yes
146DEKENSG00000124795.1737896-0.520-0.4270Yes
147SMC1AENSG00000072501.1737922-0.522-0.4203Yes
148TCF19ENSG00000137310.1237952-0.524-0.4137Yes
149NME1ENSG00000239672.738038-0.530-0.4084Yes
150BUB1BENSG00000156970.1238129-0.537-0.4031Yes
151TIPINENSG00000075131.1038235-0.545-0.3980Yes
152IPO7ENSG00000205339.1038268-0.547-0.3912Yes
153CHEK1ENSG00000149554.1338279-0.549-0.3837Yes
154TUBG1ENSG00000131462.838291-0.550-0.3763Yes
155SLBPENSG00000163950.1338304-0.552-0.3689Yes
156SPAG5ENSG00000076382.1738312-0.553-0.3614Yes
157CDCA8ENSG00000134690.1138629-0.564-0.3612Yes
158AURKAENSG00000087586.1738638-0.565-0.3535Yes
159EIF2S1ENSG00000134001.1338693-0.570-0.3468Yes
160CENPMENSG00000100162.1538711-0.572-0.3393Yes
161RAD51CENSG00000108384.1538848-0.585-0.3344Yes
162ORC6ENSG00000091651.938888-0.589-0.3271Yes
163STMN1ENSG00000117632.2338971-0.598-0.3208Yes
164MYCENSG00000136997.1939003-0.602-0.3131Yes
165DEPDC1ENSG00000024526.1739009-0.602-0.3048Yes
166TUBBENSG00000196230.1339081-0.611-0.2980Yes
167PLK4ENSG00000142731.1139267-0.620-0.2939Yes
168TOP2AENSG00000131747.1539313-0.624-0.2863Yes
169ASF1BENSG00000105011.939398-0.626-0.2796Yes
170CDK1ENSG00000170312.1639453-0.632-0.2721Yes
171TRIP13ENSG00000071539.1439454-0.632-0.2632Yes
172RACGAP1ENSG00000161800.1339469-0.633-0.2547Yes
173CSE1LENSG00000124207.1739486-0.633-0.2463Yes
174RNASEH2AENSG00000104889.639511-0.636-0.2380Yes
175PAICSENSG00000128050.839603-0.646-0.2312Yes
176GSPT1ENSG00000103342.1339655-0.655-0.2233Yes
177BARD1ENSG00000138376.1139685-0.660-0.2148Yes
178LMNB1ENSG00000113368.1239725-0.665-0.2064Yes
179MYBL2ENSG00000101057.1639815-0.677-0.1991Yes
180GINS4ENSG00000147536.1239830-0.681-0.1900Yes
181BRCA1ENSG00000012048.2239857-0.687-0.1810Yes
182BRCA2ENSG00000139618.1539873-0.690-0.1717Yes
183PRIM2ENSG00000146143.1939937-0.702-0.1635Yes
184RAD51AP1ENSG00000111247.1439953-0.704-0.1540Yes
185JPT1ENSG00000189159.1639972-0.708-0.1445Yes
186RRM2ENSG00000171848.1539983-0.710-0.1349Yes
187WEE1ENSG00000166483.1140002-0.714-0.1253Yes
188HELLSENSG00000119969.1540020-0.717-0.1157Yes
189CENPEENSG00000138778.1240145-0.740-0.1084Yes
190GINS1ENSG00000101003.1040151-0.741-0.0982Yes
191MKI67ENSG00000148773.1440220-0.757-0.0893Yes
192CDC25AENSG00000164045.1240263-0.768-0.0796Yes
193ATAD2ENSG00000156802.1340289-0.773-0.0694Yes
194DCKENSG00000156136.1040438-0.820-0.0615Yes
195MELKENSG00000165304.840497-0.839-0.0512Yes
196MCM4ENSG00000104738.1840591-0.872-0.0413Yes
197KPNA2ENSG00000182481.940625-0.887-0.0297Yes
198UBE2TENSG00000077152.1140631-0.889-0.0174Yes
199DIAPH3ENSG00000139734.1940924-1.041-0.0100Yes
200PRPS1ENSG00000147224.1140992-1.1290.0041Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS