Details for gene set HALLMARK_HEDGEHOG_SIGNALING[GSEA]

Table: GSEA Results Summary

Dataset	Normalized.Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Phenotype	Phenotype.FSHD2.ARH.cls#FSHD2_versus_ARH
Upregulated in class	FSHD2
GeneSet	HALLMARK_HEDGEHOG_SIGNALING
Enrichment Score (ES)	0.25396535
Normalized Enrichment Score (NES)	0.9060668
Nominal p-value	0.6006711
FDR q-value	0.7011138
FWER p-Value	1.0

Fig 1: Enrichment plot: HALLMARK_HEDGEHOG_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	DESCRIPTION (from dataset)	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RTN1	ENSG00000139970.17			188	1.262	0.0918	Yes
2	SLIT1	ENSG00000187122.17			635	0.962	0.1545	Yes
3	CELSR1	ENSG00000075275.16			1172	0.823	0.2044	Yes
4	GLI1	ENSG00000111087.10			1543	0.767	0.2540	Yes
5	PLG	ENSG00000122194.18			3746	0.554	0.2427	No
6	ACHE	ENSG00000087085.15			5861	0.441	0.2250	No
7	TLE3	ENSG00000140332.16			6735	0.399	0.2343	No
8	NKX6-1	ENSG00000163623.9			7545	0.369	0.2428	No
9	NRCAM	ENSG00000091129.20			9331	0.322	0.2240	No
10	ADGRG1	ENSG00000205336.12			9994	0.312	0.2317	No
11	LDB1	ENSG00000198728.10			12945	0.239	0.1782	No
12	AMOT	ENSG00000126016.15			12946	0.239	0.1965	No
13	L1CAM	ENSG00000198910.14			14319	0.197	0.1782	No
14	PTCH1	ENSG00000185920.15			14439	0.193	0.1900	No
15	TLE1	ENSG00000196781.15			14470	0.192	0.2039	No
16	SHH	ENSG00000164690.8			14613	0.187	0.2148	No
17	VEGFA	ENSG00000112715.22			15227	0.167	0.2126	No
18	CNTFR	ENSG00000122756.15			16694	0.125	0.1866	No
19	THY1	ENSG00000154096.13			17556	0.102	0.1734	No
20	SCG2	ENSG00000171951.5			21211	0.006	0.0851	No
21	HEY2	ENSG00000135547.9			22349	-0.022	0.0591	No
22	ETS2	ENSG00000157557.13			22722	-0.031	0.0524	No
23	CRMP1	ENSG00000072832.15			22813	-0.034	0.0528	No
24	VLDLR	ENSG00000147852.16			23181	-0.045	0.0473	No
25	DPYSL2	ENSG00000092964.18			23376	-0.049	0.0463	No
26	PML	ENSG00000140464.20			24111	-0.067	0.0336	No
27	HEY1	ENSG00000164683.17			24120	-0.067	0.0386	No
28	NF1	ENSG00000196712.17			29983	-0.243	-0.0854	No
29	UNC5C	ENSG00000182168.15			30578	-0.262	-0.0798	No
30	CDK5R1	ENSG00000176749.9			32195	-0.304	-0.0959	No
31	RASA1	ENSG00000145715.15			34655	-0.354	-0.1286	No
32	OPHN1	ENSG00000079482.13			36417	-0.422	-0.1392	No
33	MYH9	ENSG00000100345.21			39531	-0.641	-0.1660	No
34	NRP1	ENSG00000099250.18			40541	-0.854	-0.1252	No
35	CDK6	ENSG00000105810.9			40555	-0.858	-0.0600	No
36	NRP2	ENSG00000118257.16			40814	-0.978	0.0084	No

Fig 2: HALLMARK_HEDGEHOG_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: HALLMARK_HEDGEHOG_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_HEDGEHOG_SIGNALING