DatasetNOV0093_collapsed_to_symbols.NOV0093.cls
#obese_versus_normal.NOV0093.cls
#obese_versus_normal_repos
PhenotypeNOV0093.cls#obese_versus_normal_repos
Upregulated in class0
GeneSetSHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A5
Enrichment Score (ES)-0.43587616
Normalized Enrichment Score (NES)-1.9672991
Nominal p-value0.003976143
FDR q-value0.2551075
FWER p-Value0.601
Table: GSEA Results Summary



Fig 1: Enrichment plot: SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A5   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DLX4DLX4
Entrez,  Source
distal-less homeobox 49260.2330.0277No
2ARHGEF18ARHGEF18
Entrez,  Source
rho/rac guanine nucleotide exchange factor (GEF) 1822180.1720.0191No
3ZNF443ZNF443
Entrez,  Source
zinc finger protein 44344190.115-0.0500No
4AP1M2AP1M2
Entrez,  Source
adaptor-related protein complex 1, mu 2 subunit65090.076-0.1259No
5SEZ6L2SEZ6L2
Entrez,  Source
seizure related 6 homolog (mouse)-like 280890.051-0.1852No
6SMARCA4SMARCA4
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 483150.047-0.1815No
7RUFY3RUFY3
Entrez,  Source
RUN and FYVE domain containing 394570.032-0.2258No
8DNAJB1DNAJB1
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 198660.027-0.2368No
9ZNF562ZNF562
Entrez,  Source
zinc finger protein 562100430.025-0.2373No
10CHERPCHERP
Entrez,  Source
calcium homeostasis endoplasmic reticulum protein101400.025-0.2343No
11NR2F6NR2F6
Entrez,  Source
nuclear receptor subfamily 2, group F, member 6102080.024-0.2302No
12OTUD3OTUD3
Entrez,  Source
OTU domain containing 3106420.020-0.2447No
13RIPK4RIPK4
Entrez,  Source
receptor-interacting serine-threonine kinase 4108710.018-0.2501No
14YIPF2YIPF2
Entrez,  Source
Yip1 domain family, member 2109600.017-0.2492No
15ZNF518A120580.006-0.2993No
16GGA2GGA2
Entrez,  Source
golgi associated, gamma adaptin ear containing, ARF binding protein 2121470.005-0.3018No
17L3MBTL1125530.002-0.3204No
18TSNTSN
Entrez,  Source
translin13186-0.003-0.3494No
19TLE2TLE2
Entrez,  Source
transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)13538-0.006-0.3641No
20CDK1613762-0.008-0.3721No
21ARID4AARID4A
Entrez,  Source
AT rich interactive domain 4A (RBP1-like)14186-0.012-0.3885No
22LCMT1LCMT1
Entrez,  Source
leucine carboxyl methyltransferase 114200-0.012-0.3853No
23FBRS14631-0.016-0.4010No
24RANBP3RANBP3
Entrez,  Source
RAN binding protein 314696-0.016-0.3991No
25ZNF358ZNF358
Entrez,  Source
zinc finger protein 35814887-0.018-0.4026No
26HAUS514899-0.018-0.3976No
27CD2BP2CD2BP2
Entrez,  Source
CD2 (cytoplasmic tail) binding protein 214987-0.019-0.3960No
28SIN3BSIN3B
Entrez,  Source
SIN3 homolog B, transcription regulator (yeast)15052-0.019-0.3932No
29ARID3AARID3A
Entrez,  Source
AT rich interactive domain 3A (BRIGHT- like)15240-0.021-0.3956No
30FZR1FZR1
Entrez,  Source
fizzy/cell division cycle 20 related 1 (Drosophila)15296-0.021-0.3917No
31WDR33WDR33
Entrez,  Source
WD repeat domain 3315345-0.022-0.3873No
32VSIG1015574-0.024-0.3908No
33KDM4B16526-0.033-0.4259Yes
34F11RF11R
Entrez,  Source
F11 receptor16615-0.034-0.4198Yes
35ZNF444ZNF444
Entrez,  Source
zinc finger protein 44416691-0.034-0.4128Yes
36RALGAPA116802-0.036-0.4071Yes
37EFSEFS
Entrez,  Source
embryonal Fyn-associated substrate16810-0.036-0.3965Yes
38SHC2SHC2
Entrez,  Source
SHC (Src homology 2 domain containing) transforming protein 217013-0.038-0.3945Yes
39XAB2XAB2
Entrez,  Source
XPA binding protein 217169-0.040-0.3897Yes
40ANKS1AANKS1A
Entrez,  Source
ankyrin repeat and sterile alpha motif domain containing 1A17341-0.042-0.3850Yes
41ZSCAN1817452-0.043-0.3770Yes
42PKP4PKP4
Entrez,  Source
plakophilin 417490-0.044-0.3654Yes
43GNA11GNA11
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha 11 (Gq class)17746-0.047-0.3630Yes
44MKNK2MKNK2
Entrez,  Source
MAP kinase interacting serine/threonine kinase 217948-0.050-0.3571Yes
45CERS418030-0.051-0.3452Yes
46HOOK2HOOK2
Entrez,  Source
hook homolog 2 (Drosophila)18109-0.053-0.3328Yes
47PDK2PDK2
Entrez,  Source
pyruvate dehydrogenase kinase, isozyme 218364-0.057-0.3273Yes
48DNAJB2DNAJB2
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 218598-0.062-0.3195Yes
49DCAF1518820-0.067-0.3095Yes
50SLC25A23SLC25A23
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 2318826-0.067-0.2893Yes
51ARMCX5ARMCX5
Entrez,  Source
armadillo repeat containing, X-linked 518889-0.068-0.2714Yes
52SLC29A1SLC29A1
Entrez,  Source
solute carrier family 29 (nucleoside transporters), member 118955-0.070-0.2531Yes
53ALDOBALDOB
Entrez,  Source
aldolase B, fructose-bisphosphate18977-0.070-0.2326Yes
54RTN2RTN2
Entrez,  Source
reticulon 219341-0.081-0.2249Yes
55EPOREPOR
Entrez,  Source
erythropoietin receptor19497-0.086-0.2058Yes
56KLHL26KLHL26
Entrez,  Source
kelch-like 26 (Drosophila)19546-0.088-0.1811Yes
57ZNF34ZNF34
Entrez,  Source
zinc finger protein 3420382-0.129-0.1812Yes
58PGAP1PGAP1
Entrez,  Source
-20439-0.133-0.1431Yes
59DHRS2DHRS2
Entrez,  Source
dehydrogenase/reductase (SDR family) member 220742-0.170-0.1054Yes
60ZFP37ZFP37
Entrez,  Source
zinc finger protein 37 homolog (mouse)20796-0.179-0.0532Yes
61SYT17SYT17
Entrez,  Source
synaptotagmin XVII21000-0.2270.0068Yes
Table: GSEA details [plain text format]



Fig 2: SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A5   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A5: Random ES distribution   
Gene set null distribution of ES for SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A5