Details for gene set REACTOME_COLLAGEN_FORMATION[GSEA]

Table: GSEA Results Summary

Dataset	NOV0135_D11_log2foldchange_preranked
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	REACTOME_COLLAGEN_FORMATION
Enrichment Score (ES)	0.6142001
Normalized Enrichment Score (NES)	2.2120404
Nominal p-value	0.0
FDR q-value	4.9932295E-4
FWER p-Value	0.002

Fig 1: Enrichment plot: REACTOME_COLLAGEN_FORMATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]

	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL8A1			290	4.756	0.0565	Yes
2	COL3A1			444	4.306	0.1107	Yes
3	COL5A3			469	4.243	0.1675	Yes
4	COL12A1			502	4.180	0.2232	Yes
5	COL5A1			1472	3.013	0.2377	Yes
6	COL21A1			2309	2.471	0.2485	Yes
7	COL1A2			2328	2.443	0.2811	Yes
8	COL6A3			2337	2.421	0.3136	Yes
9	COL6A2			2413	2.363	0.3436	Yes
10	COL15A1			2422	2.359	0.3753	Yes
11	COL1A1			3148	2.121	0.3843	Yes
12	BMP1			3281	2.040	0.4084	Yes
13	PPIB			3336	2.021	0.4343	Yes
14	COL4A1			5119	1.780	0.4100	Yes
15	P4HB			5339	1.687	0.4269	Yes
16	COL4A2			5574	1.601	0.4423	Yes
17	PLOD1			5842	1.525	0.4557	Yes
18	COL8A2			5853	1.522	0.4760	Yes
19	COL6A1			6238	1.407	0.4847	Yes
20	PCOLCE			6263	1.398	0.5029	Yes
21	COL10A1			6360	1.372	0.5189	Yes
22	ADAMTS14			6371	1.371	0.5372	Yes
23	PLOD3			6373	1.370	0.5557	Yes
24	SERPINH1			6552	1.329	0.5689	Yes
25	COL23A1			6778	1.303	0.5804	Yes
26	COL13A1			7131	1.227	0.5875	Yes
27	COL11A2			7169	1.218	0.6030	Yes
28	TLL2			7355	1.201	0.6142	Yes
29	COL4A3			8325	1.035	0.6019	No
30	COL16A1			9608	0.855	0.5787	No
31	CRTAP			10843	0.734	0.5552	No
32	COL25A1			14525	0.378	0.4605	No
33	COL27A1			17169	0.099	0.3901	No
34	COL11A1			17329	0.081	0.3869	No
35	COL24A1			19120	-0.106	0.3398	No
36	COL4A6			19436	-0.138	0.3331	No
37	COL9A3			19536	-0.150	0.3325	No
38	COL7A1			19797	-0.178	0.3278	No
39	PLOD2			20084	-0.202	0.3228	No
40	COL17A1			20406	-0.234	0.3173	No
41	TLL1			20732	-0.266	0.3120	No
42	COL4A4			20885	-0.282	0.3117	No
43	ADAMTS2			21126	-0.302	0.3093	No
44	COL2A1			21231	-0.315	0.3108	No
45	ADAMTS3			22022	-0.400	0.2947	No
46	COL9A1			22587	-0.443	0.2854	No
47	COL4A5			22847	-0.469	0.2848	No
48	COL5A2			24734	-0.655	0.2425	No
49	COL14A1			25319	-0.719	0.2364	No
50	COL9A2			27990	-0.903	0.1762	No
51	COL28A1			30689	-1.145	0.1185	No
52	COL22A1			30847	-1.174	0.1301	No
53	COL19A1			31443	-1.271	0.1312	No
54	PCOLCE2			31504	-1.284	0.1470	No

Fig 2: REACTOME_COLLAGEN_FORMATION: Random ES distribution   
Gene set null distribution of ES for REACTOME_COLLAGEN_FORMATION